Factsheet for VIT_04s0008g05390.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g05350.t01	Wine grape	cytosol	85.48	85.48
VIT_04s0008g05360.t01	Wine grape	cytosol, plastid	82.9	82.64
VIT_04s0008g05410.t01	Wine grape	cytosol	76.77	77.02
VIT_04s0008g05380.t01	Wine grape	cytosol	75.81	76.05
VIT_04s0008g05370.t01	Wine grape	cytosol	74.19	74.19
VIT_04s0008g05400.t01	Wine grape	cytosol	73.23	73.23
KRH05152	Soybean	cytosol	63.55	63.75
PGSC0003DMT400040972	Potato	cytosol	62.9	62.5
Solyc08g060930.2.1	Tomato	cytosol	30.97	60.38
VIT_16s0022g02430.t01	Wine grape	cytosol	22.9	32.72
VIT_08s0040g00960.t01	Wine grape	cytosol	35.16	32.54
VIT_16s0022g02300.t01	Wine grape	cytosol	30.65	32.2
VIT_06s0009g00980.t01	Wine grape	cytosol	32.9	32.18
VIT_14s0006g03180.t01	Wine grape	cytosol	35.48	32.16
VIT_08s0032g00510.t01	Wine grape	cytosol	33.23	31.69
VIT_16s0022g02440.t01	Wine grape	cytosol	20.65	31.68
VIT_16s0100g00010.t01	Wine grape	cytosol	32.9	31.29
VIT_08s0032g00700.t01	Wine grape	cytosol	31.94	31.23
VIT_13s0084g00130.t01	Wine grape	cytosol	33.23	30.65
VIT_18s0089g00390.t01	Wine grape	endoplasmic reticulum, mitochondrion, plastid	31.61	30.62
VIT_18s0089g00370.t01	Wine grape	cytosol	32.58	30.61
VIT_07s0130g00320.t01	Wine grape	plastid	32.9	30.45
VIT_01s0011g03270.t01	Wine grape	cytosol	34.19	29.94
VIT_07s0130g00340.t01	Wine grape	plastid	32.26	29.85
VIT_18s0089g00380.t01	Wine grape	mitochondrion	31.61	29.79
VIT_18s0089g00400.t01	Wine grape	mitochondrion	31.61	28.91
VIT_15s0048g01390.t01	Wine grape	plastid	30.97	28.57
VIT_15s0048g01350.t01	Wine grape	cytosol	30.32	28.06
VIT_07s0104g00930.t01	Wine grape	cytosol	30.32	27.33
VIT_08s0040g00810.t01	Wine grape	cytosol	30.0	26.96
VIT_14s0030g00440.t01	Wine grape	cytosol	31.61	25.99

Protein Annotations

EntrezGene:100232873	wikigene:100232873	Gene3D:3.40.50.1820	MapMan:35.1	ProteinID:AAN77692	ProteinID:AAN77692.1
InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	EMBL:AF487826	EntrezGene:BIG8.1	wikigene:BIG8.1	ProteinID:CCB46799
ProteinID:CCB46799.1	UniProt:F6H321	EMBL:FN595231	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:IPR029058	InterPro:Lipase_GDXG_put_SER_AS	PFAM:PF07859
ScanProsite:PS01174	PANTHER:PTHR23024	PANTHER:PTHR23024:SF184	SUPFAM:SSF53474	UniParc:UPI00015C8461	ArrayExpress:VIT_04s0008g05390
EnsemblPlantsGene:VIT_04s0008g05390	EnsemblPlants:VIT_04s0008g05390.t01	unigene:Vvi.141	:	:	:

Description

No Description!

Coordinates

chr4:-:4839707..4840639

Molecular Weight (calculated)

34897.2 Da

IEP (calculated)

5.226

GRAVY (calculated)

-0.225

Length

310 amino acids

Sequence
(BLAST)

001: MSFIGEASAY FKVFSDGSIK RVEWESAPAS NDSSSNGYKS KDVIINSTKP ISARIFLPDV PGSSDRLPVL VYFHGGGFCL GSTTWLGYHT FLGDFAVASQ
101: SIVLSVDYRH APENRLPIAY DDCYSSLEWL SCQVSSEPWL QRADLSRVFL SGDSAGGNIV HNVALRTIQE QSCDQVKIKG LLLIHPFFGS EERIEKERAS
201: GEAENLALTD WMWKVSLPEG SNRDHYWCNY EMAELSRAEW CRFPPAVVYV AGLDFLKERG VMYAAFLEKN GVEVKLVEAE GEKHVYHMLH PESEATRLLQ
301: KQMSEFIHNF

Best Arabidopsis Sequence Match ( AT1G68620.1 )
(BLAST)

001: MGGTKLTHVT TTNPNNSNIH GPVVDEVEGL IKVYKDGHVE RSQLLPCVDP SLPLELGVTC SDVVIDKLTN VWARLYVPMT TTKSSVSKLP LIVYFHGGGF
101: CVGSASWLCY HEFLARLSAR SRCLVMSVNY RLAPENPLPA AYEDGVNAIL WLNKARNDNL WAKQCDFGRI FLAGDSAGGN IAQQVAARLA SPEDLALKIE
201: GTILIQPFYS GEERTESERR VGNDKTAVLT LASSDAWWRM SLPRGANREH PYCKPVKMII KSSTVTRTLV CVAEMDLLMD SNMEMCDGNE DVIKRVLHKG
301: VGHAFHILGK SQLAHTTTLE MLCQIDAFIH HYDPLN

Arabidopsis Description

CXE6Probable carboxylesterase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.