Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P16980_001 | Banana | mitochondrion | 83.39 | 83.11 |
| HORVU4Hr1G062060.1 | Barley | mitochondrion | 65.76 | 55.11 |
| TraesCS4D01G219100.1 | Wheat | mitochondrion | 66.1 | 54.32 |
| TraesCS4B01G218900.1 | Wheat | mitochondrion | 65.42 | 53.91 |
| TraesCS4A01G085300.1 | Wheat | mitochondrion | 65.42 | 53.61 |
| EER95156 | Sorghum | mitochondrion | 66.44 | 52.69 |
| Zm00001d047883_P001 | Maize | mitochondrion | 65.76 | 52.43 |
| Os03t0258200-01 | Rice | mitochondrion | 62.71 | 50.41 |
| VIT_14s0006g03180.t01 | Wine grape | cytosol | 57.97 | 50.0 |
| KRH01780 | Soybean | cytosol | 54.92 | 47.65 |
| CDY70129 | Canola | cytosol | 53.56 | 47.45 |
| Bra008651.1-P | Field mustard | cytosol | 52.54 | 46.69 |
| CDX69476 | Canola | cytosol | 52.54 | 46.69 |
| VIT_01s0011g03270.t01 | Wine grape | cytosol | 55.59 | 46.33 |
| KRG90787 | Soybean | cytosol, mitochondrion | 54.58 | 45.74 |
| PGSC0003DMT400033010 | Potato | cytosol | 51.19 | 45.62 |
| Solyc02g085800.1.1 | Tomato | cytosol | 52.54 | 45.19 |
| PGSC0003DMT400033749 | Potato | cytosol | 52.2 | 44.51 |
| Solyc05g009610.1.1 | Tomato | cytosol | 51.86 | 44.35 |
| KRH46912 | Soybean | cytosol | 54.24 | 44.2 |
| AT5G16080.1 | Thale cress | cytosol | 51.53 | 44.19 |
| KRH35975 | Soybean | cytosol | 46.78 | 43.67 |
| Bra004026.1-P | Field mustard | cytosol | 47.46 | 42.68 |
| Bra027693.1-P | Field mustard | cytosol | 46.44 | 40.65 |
| Bra038363.1-P | Field mustard | cytosol | 46.44 | 40.65 |
| AT1G68620.1 | Thale cress | cytosol | 45.42 | 39.88 |
| Bra004326.1-P | Field mustard | cytosol | 44.41 | 39.22 |
| Bra004327.1-P | Field mustard | cytosol | 44.41 | 39.22 |
| GSMUA_Achr2P01900_001 | Banana | cytosol | 33.22 | 31.51 |
| GSMUA_Achr8P05900_001 | Banana | cytosol | 28.81 | 31.14 |
| GSMUA_Achr4P04980_001 | Banana | cytosol | 33.56 | 30.65 |
| GSMUA_Achr7P16460_001 | Banana | cytosol | 32.88 | 29.94 |
| GSMUA_Achr6P32510_001 | Banana | cytosol | 29.15 | 29.76 |
| GSMUA_Achr11P... | Banana | cytosol | 29.49 | 28.43 |
| GSMUA_Achr3P24930_001 | Banana | cytosol | 26.78 | 25.82 |
| GSMUA_Achr8P05910_001 | Banana | cytosol | 26.44 | 25.57 |
| GSMUA_Achr10P... | Banana | cytosol | 26.44 | 25.16 |
| GSMUA_Achr6P16090_001 | Banana | cytosol | 26.1 | 25.08 |
| GSMUA_Achr5P27430_001 | Banana | cytosol | 25.08 | 24.03 |
| GSMUA_Achr9P08260_001 | Banana | plastid | 18.31 | 23.89 |
| GSMUA_Achr2P05600_001 | Banana | plastid | 24.07 | 22.61 |
| GSMUA_Achr5P27450_001 | Banana | mitochondrion | 25.42 | 22.19 |
| GSMUA_Achr9P08270_001 | Banana | cytosol, plastid | 23.73 | 21.34 |
| GSMUA_Achr6P29040_001 | Banana | plastid | 19.66 | 18.89 |
| GSMUA_Achr6P29020_001 | Banana | mitochondrion | 20.68 | 17.94 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P11300_001 | EnsemblPlants:GSMUA_Achr10T11300_001 | EnsemblPlantsGene:GSMUA_Achr10G11300_001 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | InterPro:IPR029058 |
| PANTHER:PTHR23024 | PANTHER:PTHR23024:SF93 | PFAM:PF07859 | SUPFAM:SSF53474 | UniParc:UPI000294E83D | UniProt:M0RHA6 |
| MapMan:35.1 | : | : | : | : | : |
Description
Putative Probable gibberellin receptor GID1L3 [Source:GMGC_GENE;Acc:GSMUA_Achr10G11300_001]
Coordinates
chr10:+:20817061..20818086
Molecular Weight (calculated)
32862.2 Da
IEP (calculated)
6.935
GRAVY (calculated)
-0.217
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MGALPQLIGD RRRNFHPREE DIGPVIEEIE GLIKVYRDGH VERLPAVVEV PCTWAPEPDV KLPLLVYFHG GGFCVGSASW RCYHEFLARL ASQASCVVLS
101: VNYRLAPEHR LPAAYEDGLA VMRWVTQQAS HRGPDELGWW RARCDFARVF LGGDSAGAAI AYNPFFGGVA RTSSEKNTMQ SSRSALSLTT SDCYWRMALP
201: PGTDRDHPWC NPLAKSSPKL EDLRLPPLLV CVSELDILRD RNLELCEAMS SAGKSVEQAI FAGVGHAFQV LHNHHTSDAR TSEMLTHIRA FINNR
101: VNYRLAPEHR LPAAYEDGLA VMRWVTQQAS HRGPDELGWW RARCDFARVF LGGDSAGAAI AYNPFFGGVA RTSSEKNTMQ SSRSALSLTT SDCYWRMALP
201: PGTDRDHPWC NPLAKSSPKL EDLRLPPLLV CVSELDILRD RNLELCEAMS SAGKSVEQAI FAGVGHAFQV LHNHHTSDAR TSEMLTHIRA FINNR
001: MATISFSHNH QSSDNRRGGS HHHRHGPVVE EIEGLIKVFN DGCVERPPIV PIVSPTIHPS SKATAFDIKL SNDTWTRVYI PDAAAASPSV TLPLLVYFHG
101: GGFCVGSAAW SCYHDFLTSL AVKARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLVKQQI STGGGYPSWL SKCNLSNVFL AGDSAGANIA YQVAVRIMAS
201: GKYANTLHLK GIILIHPFFG GESRTSSEKQ QHHTKSSALT LSASDAYWRL ALPRGASRDH PWCNPLMSSA GAKLPTTMVF MAEFDILKER NLEMCKVMRS
301: HGKRVEGIVH GGVGHAFHIL DNSSVSRDRI HDMMCRLHNF IHPS
101: GGFCVGSAAW SCYHDFLTSL AVKARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLVKQQI STGGGYPSWL SKCNLSNVFL AGDSAGANIA YQVAVRIMAS
201: GKYANTLHLK GIILIHPFFG GESRTSSEKQ QHHTKSSALT LSASDAYWRL ALPRGASRDH PWCNPLMSSA GAKLPTTMVF MAEFDILKER NLEMCKVMRS
301: HGKRVEGIVH GGVGHAFHIL DNSSVSRDRI HDMMCRLHNF IHPS
Arabidopsis Description
CXE17Probable carboxylesterase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFR7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.