Factsheet for GSMUA_Achr4P04980_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P32510_001	Banana	cytosol	68.42	76.47
Zm00001d032036_P001	Maize	extracellular	57.89	56.84
Os08t0547800-01	Rice	cytosol, plasma membrane	55.42	54.24
EES14122	Sorghum	cytosol	56.04	53.08
TraesCS7A01G271100.1	Wheat	cytosol, plastid	56.35	51.56
TraesCS7B01G169300.1	Wheat	cytosol, peroxisome, plastid	56.04	51.27
TraesCS7D01G271500.1	Wheat	cytosol	55.42	50.71
VIT_15s0048g01390.t01	Wine grape	plastid	52.63	50.6
HORVU7Hr1G057260.1	Barley	cytosol	54.49	49.86
VIT_15s0048g01350.t01	Wine grape	cytosol	51.08	49.25
GSMUA_Achr7P16460_001	Banana	cytosol	47.68	47.53
Solyc01g094010.2.1	Tomato	cytosol	47.37	45.13
PGSC0003DMT400000390	Potato	cytosol	47.06	44.84
KRH48319	Soybean	nucleus	45.2	43.71
Bra004924.1-P	Field mustard	cytosol	43.03	42.9
CDY18915	Canola	cytosol	43.03	42.64
AT2G45600.1	Thale cress	cytosol	43.34	42.55
CDX74751	Canola	cytosol	41.18	41.82
GSMUA_Achr6P16980_001	Banana	mitochondrion	31.27	34.12
GSMUA_Achr10P...	Banana	cytosol	30.65	33.56
GSMUA_Achr8P05900_001	Banana	cytosol	26.93	31.87
GSMUA_Achr2P01900_001	Banana	cytosol	28.17	29.26
GSMUA_Achr2P05600_001	Banana	plastid	27.86	28.66
GSMUA_Achr11P...	Banana	cytosol	26.93	28.43
GSMUA_Achr9P08270_001	Banana	cytosol, plastid	28.79	28.35
GSMUA_Achr3P24930_001	Banana	cytosol	25.7	27.12
GSMUA_Achr9P08260_001	Banana	plastid	18.89	26.99
GSMUA_Achr6P29040_001	Banana	plastid	25.39	26.71
GSMUA_Achr8P05910_001	Banana	cytosol	25.08	26.56
GSMUA_Achr10P...	Banana	cytosol	25.08	26.13
GSMUA_Achr5P27430_001	Banana	cytosol	24.77	25.97
GSMUA_Achr6P16090_001	Banana	cytosol	24.46	25.73
GSMUA_Achr6P29020_001	Banana	mitochondrion	26.32	25.0
GSMUA_Achr5P27450_001	Banana	mitochondrion	24.77	23.67

Protein Annotations

EnsemblPlants:GSMUA_Achr4P04980_001	EnsemblPlants:GSMUA_Achr4T04980_001	EnsemblPlantsGene:GSMUA_Achr4G04980_001	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058
InterPro:Lipase_GDXG_HIS_AS	PANTHER:PTHR23024	PANTHER:PTHR23024:SF113	PFAM:PF07859	ScanProsite:PS01173	SEG:seg
SUPFAM:SSF53474	UniParc:UPI000294FDDC	UniProt:M0SL65	MapMan:35.1	:	:

Description

Putative Probable gibberellin receptor GID1L2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G04980_001]

Coordinates

chr4:+:3892672..3893784

Molecular Weight (calculated)

35668.6 Da

IEP (calculated)

5.531

GRAVY (calculated)

-0.069

Length

323 amino acids

Sequence
(BLAST)

001: MADLSSEENA SSKSTSLLLQ IVEHPDGSVS RPFVPISAPS DDRPDAAVLS KDVPLNPTHD TWLRIYRPTV VHHTTKLPIV IYFHGGGFVV FSAASTFYHG
101: LCEAMTGAIS ALVVSLEYRL APEHRLPAAY EDAVETVLWI QSQARDPAAG EPWLVHHGDF SRCFLMGSSS GANMAYHAGL LATALELLPL RLLGLILNQP
201: YFGGVERTPS EIRSEDDPIL PLQANDTLWR LALPKGAERD HEFCNPVVAV PPELRHLPRC LVKGCEGDPL VDRQREFVRM LQREGASVVA RVDEGGFHSV
301: ELLDPIRAES LFAEVRRFIR NDL

Best Arabidopsis Sequence Match ( AT2G45600.1 )
(BLAST)

001: MEAPPPSSDP YKFLNITLNS DGSLTRHRDF PKLPPTEQSK DIPLNQTNNT FIRIFKPRNI PPESKLPILV YFHGGGFILY SAASAPFHES CTKMADRLQT
101: IILSVEYRLA PEHRLPAAYE DAVEAILWLR DQARGPINGG DCDTWLKDGV DFSKCYVMGS SSGGNIVYNV ALRVVDTDLS PVKIQGLIMN QAFFGGVEPS
201: DSESRLKDDK ICPLPATHLL WSLCLPDGVD RDHVYSNPIK SSGPQEKDKM GRFPSTLING YGGDPLVDRQ RHVAEMLKGR GVHVETRFDK DGFHACELFD
301: GNKAKALYET VEAFMKSCSS TGPSSNSNM

Arabidopsis Description

CXE8Probable carboxylesterase 8 [Source:UniProtKB/Swiss-Prot;Acc:O64640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.