Factsheet for GSMUA_Achr7P16460_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0048g01390.t01	Wine grape	plastid	55.56	53.57
VIT_15s0048g01350.t01	Wine grape	cytosol	52.16	50.45
KRH48319	Soybean	nucleus	51.85	50.3
CDY18915	Canola	cytosol	48.77	48.47
Bra004924.1-P	Field mustard	cytosol	48.46	48.46
GSMUA_Achr4P04980_001	Banana	cytosol	47.53	47.68
CDX74751	Canola	cytosol	46.6	47.48
Solyc01g094010.2.1	Tomato	cytosol	49.38	47.2
PGSC0003DMT400000390	Potato	cytosol	49.38	47.2
AT2G45600.1	Thale cress	cytosol	47.84	47.11
GSMUA_Achr6P32510_001	Banana	cytosol	41.98	47.06
HORVU4Hr1G062730.1	Barley	peroxisome	47.53	46.95
TraesCS4A01G081600.1	Wheat	peroxisome	47.84	46.55
TraesCS4D01G222700.1	Wheat	peroxisome	46.91	45.92
TraesCS4B01G222200.1	Wheat	peroxisome	46.6	45.9
Zm00001d028440_P001	Maize	peroxisome	46.3	45.32
EER92547	Sorghum	cytosol	45.99	45.02
Os03t0252100-01	Rice	cytosol, peroxisome	48.46	44.99
GSMUA_Achr6P16980_001	Banana	mitochondrion	30.86	33.78
GSMUA_Achr10P...	Banana	cytosol	29.94	32.88
GSMUA_Achr11P...	Banana	cytosol	30.56	32.35
GSMUA_Achr8P05900_001	Banana	cytosol	27.16	32.23
GSMUA_Achr2P01900_001	Banana	cytosol	30.25	31.51
GSMUA_Achr2P05600_001	Banana	plastid	28.4	29.3
GSMUA_Achr9P08270_001	Banana	cytosol, plastid	28.7	28.35
GSMUA_Achr9P08260_001	Banana	plastid	19.14	27.43
GSMUA_Achr8P05910_001	Banana	cytosol	25.31	26.89
GSMUA_Achr6P29040_001	Banana	plastid	25.0	26.38
GSMUA_Achr6P16090_001	Banana	cytosol	24.69	26.06
GSMUA_Achr10P...	Banana	cytosol	24.69	25.81
GSMUA_Achr3P24930_001	Banana	cytosol	24.07	25.49
GSMUA_Achr5P27430_001	Banana	cytosol	24.07	25.32
GSMUA_Achr6P29020_001	Banana	mitochondrion	26.23	25.0
GSMUA_Achr5P27450_001	Banana	mitochondrion	24.38	23.37

Protein Annotations

EnsemblPlants:GSMUA_Achr7P16460_001	EnsemblPlants:GSMUA_Achr7T16460_001	EnsemblPlantsGene:GSMUA_Achr7G16460_001	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058
PANTHER:PTHR23024	PANTHER:PTHR23024:SF113	PFAM:PF07859	SEG:seg	SUPFAM:SSF53474	UniParc:UPI00029503B7
UniProt:M0TI33	MapMan:35.1	:	:	:	:

Description

gibberellin receptor GID1L2, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G16460_001]

Coordinates

chr7:-:14281819..14282793

Molecular Weight (calculated)

35458.8 Da

IEP (calculated)

5.660

GRAVY (calculated)

-0.050

Length

324 amino acids

Sequence
(BLAST)

001: MDPYKLLRVS LNPDGSLTRS DLIPLLPPSD PAVLCQDLPL NPARGTTFRL FLPRQPPPAP KLPLILYFHG GGFILFRAAS GPIHAACARL AASLPAIVLS
101: VDYRLAPEHR LPAAYDDALD AFLWLRSQAA DGRGDLPFRY CADFSRCFLM GTSAGGNIAF YAAVRAAALT DSLHPVKIAG LVLDQPYFGG VERTESEERA
201: KEDKIIPLVA NDLMWELALP EGANRDHEYC NPMANEAKLL AAVGNLPRCL VRGHIGDPLY DRQREFAGML ERRGVSVVAR MESEGLHGME MFDASKEEEL
301: VADVRRFLYF EDGGGSAGVG LQRL

Best Arabidopsis Sequence Match ( AT2G45600.1 )
(BLAST)

001: MEAPPPSSDP YKFLNITLNS DGSLTRHRDF PKLPPTEQSK DIPLNQTNNT FIRIFKPRNI PPESKLPILV YFHGGGFILY SAASAPFHES CTKMADRLQT
101: IILSVEYRLA PEHRLPAAYE DAVEAILWLR DQARGPINGG DCDTWLKDGV DFSKCYVMGS SSGGNIVYNV ALRVVDTDLS PVKIQGLIMN QAFFGGVEPS
201: DSESRLKDDK ICPLPATHLL WSLCLPDGVD RDHVYSNPIK SSGPQEKDKM GRFPSTLING YGGDPLVDRQ RHVAEMLKGR GVHVETRFDK DGFHACELFD
301: GNKAKALYET VEAFMKSCSS TGPSSNSNM

Arabidopsis Description

CXE8Probable carboxylesterase 8 [Source:UniProtKB/Swiss-Prot;Acc:O64640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.