CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97587
KRH31287

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G04770.1	KRG97587	AT5G10210.1	21798944
AT4G04770.1	KRH31287	AT5G10210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0116g01910.t01	Wine grape	cytosol, mitochondrion	79.76	77.91
CDX97313	Canola	vacuole	47.62	35.71
GSMUA_Achr3P14230_001	Banana	cytosol	73.81	24.31
Zm00001d042998_P001	Maize	plastid	60.71	21.61
CDX91226	Canola	cytosol	50.0	18.18
GSMUA_Achr1P17690_001	Banana	mitochondrion	71.43	17.91
Zm00001d012465_P001	Maize	plastid	63.1	17.61
KRH03586	Soybean	plastid	83.33	13.21
AT5G44316.1	Thale cress	plastid	72.62	12.98
KRH20223	Soybean	plastid	83.33	12.87
Solyc03g031700.2.1	Tomato	plastid	79.76	12.23
Solyc02g080440.2.1	Tomato	plastid	78.57	12.09
PGSC0003DMT400013035	Potato	plastid	78.57	12.04
PGSC0003DMT400042503	Potato	plastid	77.38	11.9
AT4G04770.1	Thale cress	plastid	73.81	11.13
Bra029516.1-P	Field mustard	plastid	72.62	11.05
TraesCS3D01G343800.1	Wheat	plastid	64.29	10.53
TraesCS3B01G382400.1	Wheat	plastid	64.29	9.96
Os01t0830000-01	Rice	plasma membrane, plastid	64.29	9.93
TraesCS3A01G349800.1	Wheat	plastid	64.29	9.93
EES03828	Sorghum	plastid	63.1	9.78
KRH63379	Soybean	cytosol	22.62	9.05
HORVU3Hr1G087860.1	Barley	plastid	64.29	8.27
KRH28278	Soybean	plastid	26.19	4.82
KRH77216	Soybean	plasma membrane	8.33	2.33

Protein Annotations

EMBL:ACUP02009540	EnsemblPlants:KRH13114	EnsemblPlantsGene:GLYMA_15G217000	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016226	InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf	PANTHER:PTHR30508
PFAM:PF01458	ProteinID:KRH13114	ProteinID:KRH13114.1	SUPFAM:SSF101960	UniParc:UPI000295A654	UniProt:K7MCX9
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:35755170..35755938

Molecular Weight (calculated)

9657.5 Da

IEP (calculated)

4.414

GRAVY (calculated)

-0.321

Length

84 amino acids

Sequence
(BLAST)

1: MESMWRLTCD FTVKNPTARI EHEASTSKIG EDQLFYFQQR GIDYEKAMGA MISRFCCDVF NELPYEFGSE VNQLMSLKLE GSVG

Best Arabidopsis Sequence Match ( AT5G44316.1 )
(BLAST)

001: MASLFAIGFS KFSPQPTSDY SKLLKVFHPK PYSLKFLFLK TLNPTRFFKV RANDGTEPSD KLQQYFQNQD YDKKYGFLEN IDSFTIPKGL SEETIRLISK
101: LKKEPAWILE YRLKAYAKFL KLEEPKWSDN RYPLLDLQDM CFYSAPKKKP TLNSSDIADE ADDPKLLEEF DRLDVPLTKK KKCSPKVAVD AVYNSESIAI
201: TNKEPLEKSG VIFCSISEAI RKYPDLIKKY LGRVVPSDDN YYAALNTAVF SDGSFCYIPK NTRCPMPLSS YFRMNSIENT GQFERTLIVA EEGSFVEYSE
301: GCTAISHDKN QLHAAVVELY CAEGAEIKYS TRGLCAGDRS KISWTQVEKG FAITWKYPSV VLEGDDSVGE AENARNTSTC DSMLIGDNAA ANTYPYIQVK
401: NPSARIEHEA STSKIGEDQI FYFQQRGIDH ERALAAMISG FCRDVFNKLP NEFGAEVNQL LSIKLEGSVG

Arabidopsis Description

ABCI9Putative UPF0051 protein ABCI9 [Source:UniProtKB/Swiss-Prot;Acc:Q3E8H7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.