CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G382400.1	Wheat	plastid	92.44	92.44
TraesCS3A01G349800.1	Wheat	plastid	92.07	91.73
TraesCS3D01G343800.1	Wheat	plastid	84.32	89.08
Os01t0830000-01	Rice	plasma membrane, plastid	86.53	86.21
GSMUA_Achr1P17690_001	Banana	mitochondrion	50.92	82.39
GSMUA_Achr3P14230_001	Banana	cytosol	38.75	82.35
Zm00001d012465_P001	Maize	plastid	43.17	77.74
Zm00001d042998_P001	Maize	plastid	33.21	76.27
CDX91226	Canola	cytosol	31.0	72.73
HORVU3Hr1G087860.1	Barley	plastid	85.79	71.21
KRH03586	Soybean	plastid	66.79	68.3
KRH20223	Soybean	plastid	68.27	68.01
PGSC0003DMT400042503	Potato	plastid	68.27	67.77
Solyc03g031700.2.1	Tomato	plastid	68.27	67.52
PGSC0003DMT400013035	Potato	plastid	68.08	67.34
Solyc02g080440.2.1	Tomato	plastid	67.71	67.22
Bra029516.1-P	Field mustard	plastid	68.45	67.21
AT4G04770.1	Thale cress	plastid	67.9	66.07
CDY16648	Canola	plastid	56.83	64.3
VIT_10s0116g01920.t01	Wine grape	plastid	60.33	64.24
CDX94573	Canola	plastid	56.27	64.08
KRH13114	Soybean	cytosol, plastid	9.78	63.1
VIT_10s0116g01910.t01	Wine grape	cytosol, mitochondrion	9.78	61.63
AT5G44316.1	Thale cress	plastid	51.66	59.57
CDX97313	Canola	vacuole	8.12	39.29
EES02550	Sorghum	plastid	15.5	17.54

Protein Annotations

MapMan:7.11.1.1.1.1	EntrezGene:8085420	UniProt:C5XNY9	EnsemblPlants:EES03828	ProteinID:EES03828	ProteinID:EES03828.1
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016226
PFAM:PF01458	PANTHER:PTHR30508	PANTHER:PTHR30508:SF1	EnsemblPlantsGene:SORBI_3003G343400	SUPFAM:SSF101960	InterPro:SUF_FeS_clus_asmbl_SufB
InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf	unigene:Sbi.3934	TIGRFAMs:TIGR01980	UniParc:UPI0001A8586E	RefSeq:XP_002458708.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:66527661..66532092

Molecular Weight (calculated)

59476.1 Da

IEP (calculated)

6.207

GRAVY (calculated)

-0.319

Length

542 amino acids

Sequence
(BLAST)

001: MAASASTPLF SPCALTSKLG VGHASYGSGR RANVRRRGRL SVVAVQTGPQ KPSPSSSQAA AAEDEADALQ KLLKREYKYG FVSDFESFSI PKGLSEATVR
101: RISELKAEPA WMLDFRLAAY RRFLTMVEPT WSDNEYAPVD LQSICYYSAP KTKPKLNSLD EVDPELLKTF DRLGIPLTEQ KRLTNVAVDA VIDSTSIATT
201: HREALMAKGV IFCSISEAIR EYPDLVRRYL GSVVPPGDNY YAALNSAVFS DGSFCYVPKD TVCPMEISTY FRINDKETGQ FERTLIVADE RSTVSYLEGC
301: TAPAYDSNQL HAAVVELVCE EGAEIKYSTV QNWYSGDEEG KGGIYNFVTK RGRCKGRGSK ISWTQVETGS AITWKYPSVE LVGDDSVGEF YSVALTKDCQ
401: QADTGTKMIH KGKNSRSRII SKGISAGKSR NCYRGLVLMN SSAENAYNSS QCDSLLIGDN AAANTYPTIQ VGCTSGRVEH EASTSKIGED QLFYFQQRGV
501: DHEKAVAAMI GGFCRSVFEH LPYEFAQEVD ALMNLKLEGS VG

Best Arabidopsis Sequence Match ( AT4G04770.1 )
(BLAST)

001: MASLLANGIS SFSPQPTSDS SKSPKGFHPK PESLKFPSPK SLNPTRPIFK LRADVGIDSR PIGASESSSS GTSTVSSTDK LQQYFQNLDY DKKYGFVEDI
101: DSFTIPKGLS EETIRLISKL KEEPDWMLEF RFKAYAKFLK LEEPKWSDNR YPSINFQDMC YYSAPKKKPT LNSLDEVDPQ LLEYFDKLGV PLTEQKRLAN
201: VAVDAVIDSV SIATTHRKTL EKSGVIFCSI SEAIREYPDL IKKYLGRVVP SDDNYYAALN SAVFSDGSFC YIPKNTRCPM PISTYFRINA METGQFERTL
301: IVAEEGSFVE YLEGCTAPSY DTNQLHAAVV ELYCGKGAEI KYSTVQNWYA GDEQGKGGIY NFVTKRGLCA GDRSKISWTQ VETGSAITWK YPSVVLEGDD
401: SVGEFYSVAL TNNYQQADTG TKMIHKGKNT KSRIISKGIS AGHSRNCYRG LVQVQSKAEG AKNTSTCDSM LIGDKAAANT YPYIQVKNPS AKVEHEASTS
501: KIGEDQLFYF QQRGIDHERA LAAMISGFCR DVFNKLPDEF GAEVNQLMSI KLEGSVG

Arabidopsis Description

ABCI8UPF0051 protein ABCI8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZS97]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.