Factsheet for GSMUA_Achr1P17690_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13114	Soybean	cytosol, plastid	17.91	71.43
VIT_10s0116g01910.t01	Wine grape	cytosol, mitochondrion	18.21	70.93
GSMUA_Achr3P14230_001	Banana	cytosol	52.84	69.41
CDY16648	Canola	plastid	76.42	53.44
CDX94573	Canola	plastid	75.82	53.36
TraesCS3D01G343800.1	Wheat	plastid	81.19	53.02
EES03828	Sorghum	plastid	82.39	50.92
TraesCS3B01G382400.1	Wheat	plastid	81.19	50.18
Os01t0830000-01	Rice	plasma membrane, plastid	81.49	50.18
AT5G44316.1	Thale cress	plastid	70.15	50.0
TraesCS3A01G349800.1	Wheat	plastid	81.19	50.0
KRH03586	Soybean	plastid	78.51	49.62
KRH20223	Soybean	plastid	79.1	48.71
Bra029516.1-P	Field mustard	plastid	77.31	46.92
PGSC0003DMT400042503	Potato	plastid	76.42	46.89
Solyc02g080440.2.1	Tomato	plastid	76.42	46.89
Solyc03g031700.2.1	Tomato	plastid	76.12	46.53
PGSC0003DMT400013035	Potato	plastid	75.82	46.35
AT4G04770.1	Thale cress	plastid	77.01	46.32
Zm00001d012465_P001	Maize	plastid	37.91	42.19
HORVU3Hr1G087860.1	Barley	plastid	81.19	41.65
VIT_10s0116g01920.t01	Wine grape	plastid	62.09	40.86
CDX97313	Canola	vacuole	13.43	40.18
CDX91226	Canola	cytosol	27.16	39.39
Zm00001d042998_P001	Maize	plastid	26.57	37.71
GSMUA_Achr3P00110_001	Banana	mitochondrion	5.07	14.78
GSMUA_Achr10P...	Banana	plastid	17.61	12.04

Protein Annotations

EnsemblPlants:GSMUA_Achr1P17690_001	EnsemblPlants:GSMUA_Achr1T17690_001	EnsemblPlantsGene:GSMUA_Achr1G17690_001	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016226	InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf	PANTHER:PTHR30508
PANTHER:PTHR30508:SF1	PFAM:PF01458	SEG:seg	SUPFAM:SSF101960	UniParc:UPI0002954ADE	UniProt:M0S0S7
MapMan:35.1	:	:	:	:	:

Description

UPF0051 protein ABCI8, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G17690_001]

Coordinates

chr1:+:13157528..13161409

Molecular Weight (calculated)

37705.6 Da

IEP (calculated)

4.933

GRAVY (calculated)

-0.362

Length

335 amino acids

Sequence
(BLAST)

001: MLQFRLRAFR RFQAMREPQW SDNRYPPIDL QSICYYSEPK RKPKLGSLDE VDPKLLETFD RLGIPLNEQK RLANVAVDAV IDSTSIATTH RAALAEKGVI
101: FCSISEAIRE YPDLVRRYLG EVVPPGDNYY AALNSAVFSD GSFCYIPKDT VSPMEISTYF RINDRETGQF ERTLIIADER SYLYCHEGAE IKYSTRGLCQ
201: GKGSKISWTQ VETGSAITWK YPSVILRGDD TVQPDAENAR NFSQCDSMLI GDTAGANTYP YIEVKNPTAC VEHEASTSKI GEDQLFYFQQ RGIDHEKAVA
301: AMIGGFCRDV FDKLPLEFAS EVNALMNLKL EGSVG

Best Arabidopsis Sequence Match ( AT4G04770.1 )
(BLAST)

001: MASLLANGIS SFSPQPTSDS SKSPKGFHPK PESLKFPSPK SLNPTRPIFK LRADVGIDSR PIGASESSSS GTSTVSSTDK LQQYFQNLDY DKKYGFVEDI
101: DSFTIPKGLS EETIRLISKL KEEPDWMLEF RFKAYAKFLK LEEPKWSDNR YPSINFQDMC YYSAPKKKPT LNSLDEVDPQ LLEYFDKLGV PLTEQKRLAN
201: VAVDAVIDSV SIATTHRKTL EKSGVIFCSI SEAIREYPDL IKKYLGRVVP SDDNYYAALN SAVFSDGSFC YIPKNTRCPM PISTYFRINA METGQFERTL
301: IVAEEGSFVE YLEGCTAPSY DTNQLHAAVV ELYCGKGAEI KYSTVQNWYA GDEQGKGGIY NFVTKRGLCA GDRSKISWTQ VETGSAITWK YPSVVLEGDD
401: SVGEFYSVAL TNNYQQADTG TKMIHKGKNT KSRIISKGIS AGHSRNCYRG LVQVQSKAEG AKNTSTCDSM LIGDKAAANT YPYIQVKNPS AKVEHEASTS
501: KIGEDQLFYF QQRGIDHERA LAAMISGFCR DVFNKLPDEF GAEVNQLMSI KLEGSVG

Arabidopsis Description

ABCI8UPF0051 protein ABCI8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZS97]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.