Factsheet for GSMUA_Achr3P14230_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13114	Soybean	cytosol, plastid	24.31	73.81
VIT_10s0116g01910.t01	Wine grape	cytosol, mitochondrion	24.31	72.09
CDX91226	Canola	cytosol	58.43	64.5
Zm00001d012465_P001	Maize	plastid	73.33	62.13
Zm00001d042998_P001	Maize	plastid	50.2	54.24
GSMUA_Achr1P17690_001	Banana	mitochondrion	69.41	52.84
GSMUA_Achr3P00110_001	Banana	mitochondrion	19.61	43.48
CDX97313	Canola	vacuole	18.43	41.96
TraesCS3D01G343800.1	Wheat	plastid	82.75	41.13
KRH03586	Soybean	plastid	83.53	40.19
KRH20223	Soybean	plastid	83.92	39.34
TraesCS3B01G382400.1	Wheat	plastid	82.75	38.93
TraesCS3A01G349800.1	Wheat	plastid	82.75	38.79
EES03828	Sorghum	plastid	82.35	38.75
PGSC0003DMT400042503	Potato	plastid	82.35	38.46
Solyc02g080440.2.1	Tomato	plastid	82.35	38.46
Os01t0830000-01	Rice	plasma membrane, plastid	81.57	38.24
Bra029516.1-P	Field mustard	plastid	82.75	38.22
PGSC0003DMT400013035	Potato	plastid	81.96	38.14
Solyc03g031700.2.1	Tomato	plastid	81.96	38.14
AT4G04770.1	Thale cress	plastid	81.57	37.34
HORVU3Hr1G087860.1	Barley	plastid	82.35	32.16
CDY16648	Canola	plastid	58.43	31.11
CDX94573	Canola	plastid	58.04	31.09
VIT_10s0116g01920.t01	Wine grape	plastid	60.39	30.26
AT5G44316.1	Thale cress	plastid	55.69	30.21
GSMUA_Achr10P...	Banana	plastid	21.57	11.22

Protein Annotations

EnsemblPlants:GSMUA_Achr3P14230_001	EnsemblPlants:GSMUA_Achr3T14230_001	EnsemblPlantsGene:GSMUA_Achr3G14230_001	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016226	InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf	PANTHER:PTHR30508
PANTHER:PTHR30508:SF1	PFAM:PF01458	SUPFAM:SSF101960	UniParc:UPI0002969569	UniProt:M0SEJ0	MapMan:35.1

Description

UPF0051 protein ABCI8, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G14230_001]

Coordinates

chr3:-:13334886..13337555

Molecular Weight (calculated)

28390.4 Da

IEP (calculated)

6.517

GRAVY (calculated)

-0.490

Length

255 amino acids

Sequence
(BLAST)

001: MEISTYFRIN DRETGQFERT LIIADERSYL YCHEGAEIKY STVQNWYAGD EEGNGGIYNF VTKRGLCQGK GSKISWTQVE TGSAITWKYP SVILRGDDSM
101: GEFYSVALTK NFQQADTGTK MIHQGKNTRS RIVSKGISAG KSTNCYRGLV KVQPDAENSR NFSQCDSMLI GDAAGANTYP YIEVKNPTAR VEHEASTSKI
201: GEDQLFYFQQ RGIDHEKAVA AMIGGFCRDV FNKLPLEFAS EVNALMNLKL EGSVG

Best Arabidopsis Sequence Match ( AT4G04770.1 )
(BLAST)

001: MASLLANGIS SFSPQPTSDS SKSPKGFHPK PESLKFPSPK SLNPTRPIFK LRADVGIDSR PIGASESSSS GTSTVSSTDK LQQYFQNLDY DKKYGFVEDI
101: DSFTIPKGLS EETIRLISKL KEEPDWMLEF RFKAYAKFLK LEEPKWSDNR YPSINFQDMC YYSAPKKKPT LNSLDEVDPQ LLEYFDKLGV PLTEQKRLAN
201: VAVDAVIDSV SIATTHRKTL EKSGVIFCSI SEAIREYPDL IKKYLGRVVP SDDNYYAALN SAVFSDGSFC YIPKNTRCPM PISTYFRINA METGQFERTL
301: IVAEEGSFVE YLEGCTAPSY DTNQLHAAVV ELYCGKGAEI KYSTVQNWYA GDEQGKGGIY NFVTKRGLCA GDRSKISWTQ VETGSAITWK YPSVVLEGDD
401: SVGEFYSVAL TNNYQQADTG TKMIHKGKNT KSRIISKGIS AGHSRNCYRG LVQVQSKAEG AKNTSTCDSM LIGDKAAANT YPYIQVKNPS AKVEHEASTS
501: KIGEDQLFYF QQRGIDHERA LAAMISGFCR DVFNKLPDEF GAEVNQLMSI KLEGSVG

Arabidopsis Description

ABCI8UPF0051 protein ABCI8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZS97]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.