Factsheet for TraesCS3D01G343800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G382400.1	Wheat	plastid	92.59	87.64
TraesCS3A01G349800.1	Wheat	plastid	92.59	87.32
EES03828	Sorghum	plastid	89.08	84.32
Os01t0830000-01	Rice	plasma membrane, plastid	88.69	83.64
GSMUA_Achr3P14230_001	Banana	cytosol	41.13	82.75
GSMUA_Achr1P17690_001	Banana	mitochondrion	53.02	81.19
Zm00001d012465_P001	Maize	plastid	43.86	74.75
CDX91226	Canola	cytosol	33.14	73.59
HORVU3Hr1G087860.1	Barley	plastid	91.62	71.98
Zm00001d042998_P001	Maize	plastid	32.36	70.34
KRH03586	Soybean	plastid	71.34	69.06
KRH20223	Soybean	plastid	71.15	67.1
Bra029516.1-P	Field mustard	plastid	72.12	67.03
PGSC0003DMT400042503	Potato	plastid	70.18	65.93
AT4G04770.1	Thale cress	plastid	71.34	65.71
PGSC0003DMT400013035	Potato	plastid	69.98	65.51
Solyc02g080440.2.1	Tomato	plastid	69.59	65.38
Solyc03g031700.2.1	Tomato	plastid	69.79	65.33
KRH13114	Soybean	cytosol, plastid	10.53	64.29
CDY16648	Canola	plastid	59.45	63.67
CDX94573	Canola	plastid	59.06	63.66
VIT_10s0116g01910.t01	Wine grape	cytosol, mitochondrion	10.53	62.79
VIT_10s0116g01920.t01	Wine grape	plastid	61.79	62.28
AT5G44316.1	Thale cress	plastid	54.19	59.15
CDX97313	Canola	vacuole	8.77	40.18
TraesCS3D01G032700.1	Wheat	plastid	16.57	17.93

Protein Annotations

EnsemblPlants:TraesCS3D01G343800.1	EnsemblPlantsGene:TraesCS3D01G343800	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016226	InterPro:SUF_FeS_clus_asmbl_SufB	InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf	PANTHER:PTHR30508
PANTHER:PTHR30508:SF1	PFAM:PF01458	SEG:seg	SUPFAM:SSF101960	TIGRFAMs:TIGR01980	MapMan:7.11.1.1.1.1

Description

No Description!

Coordinates

chr3D:-:455871399..455875458

Molecular Weight (calculated)

56215.1 Da

IEP (calculated)

5.079

GRAVY (calculated)

-0.300

Length

513 amino acids

Sequence
(BLAST)

001: MAASASASTS LSVVAVQTGP QKPSPSPSPS SPAADEAEAL QNLLKREYKY GFVSDFESFS IPKGLSEATV RRISELKAEP AWMLDFRLAA YRRFLTMAEP
101: TWSDNVYSPV DLQSLCFYSA PKTKPKLNSL DEVDPELLKT FDRLGIPLGE QKRLSNVAVD AVIDSTSIAT THREALMAKG VIFCSISEAI REYPDLIKRY
201: IGSIVPPGDN YYAALNSAVF SDGSFCYVPK DTVCPMEIST YFRINDKETG QFERTLIVAD ERSTVSYLEG CTAPAYDSNQ LHAAVVELVC EEGAEIKYST
301: VQNWYAGDEE GKGGIYNFVT KRGRCKGRGS KISWTQVETG SAITWKYPSV ELVGDDTVGE FYSVALTKDY QQADTGTKMI HKGKNSRSRI ISKGISAGKS
401: RNCYRGLVQM NSGAENAYNS SQCDSLLIGD NAAANTYPTI QVGCTSGRVE HEASTSKIGE DQLFYFQQRG IDHEKAVAAM IGGFCRAVFE HLPYEFAQEV
501: DALMNLKLEG SVG

Best Arabidopsis Sequence Match ( AT4G04770.1 )
(BLAST)

001: MASLLANGIS SFSPQPTSDS SKSPKGFHPK PESLKFPSPK SLNPTRPIFK LRADVGIDSR PIGASESSSS GTSTVSSTDK LQQYFQNLDY DKKYGFVEDI
101: DSFTIPKGLS EETIRLISKL KEEPDWMLEF RFKAYAKFLK LEEPKWSDNR YPSINFQDMC YYSAPKKKPT LNSLDEVDPQ LLEYFDKLGV PLTEQKRLAN
201: VAVDAVIDSV SIATTHRKTL EKSGVIFCSI SEAIREYPDL IKKYLGRVVP SDDNYYAALN SAVFSDGSFC YIPKNTRCPM PISTYFRINA METGQFERTL
301: IVAEEGSFVE YLEGCTAPSY DTNQLHAAVV ELYCGKGAEI KYSTVQNWYA GDEQGKGGIY NFVTKRGLCA GDRSKISWTQ VETGSAITWK YPSVVLEGDD
401: SVGEFYSVAL TNNYQQADTG TKMIHKGKNT KSRIISKGIS AGHSRNCYRG LVQVQSKAEG AKNTSTCDSM LIGDKAAANT YPYIQVKNPS AKVEHEASTS
501: KIGEDQLFYF QQRGIDHERA LAAMISGFCR DVFNKLPDEF GAEVNQLMSI KLEGSVG

Arabidopsis Description

ABCI8UPF0051 protein ABCI8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZS97]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.