Factsheet for Zm00001d042998_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012465_P001	Maize	plastid	83.47	65.45
VIT_10s0116g01910.t01	Wine grape	cytosol, mitochondrion	22.46	61.63
KRH13114	Soybean	cytosol, plastid	21.61	60.71
GSMUA_Achr3P14230_001	Banana	cytosol	54.24	50.2
CDX91226	Canola	cytosol	37.29	38.1
CDX97313	Canola	vacuole	17.37	36.61
EES03828	Sorghum	plastid	76.27	33.21
TraesCS3D01G343800.1	Wheat	plastid	70.34	32.36
TraesCS3B01G382400.1	Wheat	plastid	73.73	32.1
TraesCS3A01G349800.1	Wheat	plastid	72.46	31.43
Os01t0830000-01	Rice	plasma membrane, plastid	69.92	30.33
GSMUA_Achr1P17690_001	Banana	mitochondrion	37.71	26.57
HORVU3Hr1G087860.1	Barley	plastid	69.49	25.11
KRH03586	Soybean	plastid	56.36	25.09
KRH20223	Soybean	plastid	57.2	24.82
Solyc03g031700.2.1	Tomato	plastid	57.2	24.64
PGSC0003DMT400042503	Potato	plastid	56.78	24.54
Solyc02g080440.2.1	Tomato	plastid	56.78	24.54
PGSC0003DMT400013035	Potato	plastid	56.78	24.45
Bra029516.1-P	Field mustard	plastid	56.78	24.28
AT4G04770.1	Thale cress	plastid	56.36	23.88
AT5G44316.1	Thale cress	plastid	38.98	19.57
CDX94573	Canola	plastid	38.56	19.12
CDY16648	Canola	plastid	38.56	19.0
VIT_10s0116g01920.t01	Wine grape	plastid	36.44	16.9
Zm00001d008549_P002	Maize	plastid	21.61	10.6

Protein Annotations

EnsemblPlants:Zm00001d042998_P001	EnsemblPlants:Zm00001d042998_T001	EnsemblPlantsGene:Zm00001d042998	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016226	InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf	PANTHER:PTHR30508
PANTHER:PTHR30508:SF1	PFAM:PF01458	ProteinID:ONM36694.1	SEG:seg	SUPFAM:SSF101960	UniParc:UPI000844AE2A
UniProt:A0A1D6N7Y2	MapMan:35.1	:	:	:	:

Description

UPF0051 protein ABCI8 chloroplastic

Coordinates

chr3:+:186201395..186204591

Molecular Weight (calculated)

25314.9 Da

IEP (calculated)

8.971

GRAVY (calculated)

-0.341

Length

236 amino acids

Sequence
(BLAST)

001: MAASASTTLF SPCALTSKLG AGHASYGSVR RANVRRRGRL SVVAVQTGPQ KPSPLSSQAA AAEDEADALQ KLLKREYKYG VGEFYSVALT KDCQQADTGT
101: KMIHKGKNSR SRIISKGISA GKSRNCYRGL VLMNSSAENA YNSSQCDSLL IGDNAAANTY PTIQVGCTSG RVEHEASTSK IGEDQLFYFQ QRGVDHEKAV
201: AAMIGGFCRS VFEHLPYEFA QEVDALMNLK LEGSVG

Best Arabidopsis Sequence Match ( AT4G04770.1 )
(BLAST)

001: MASLLANGIS SFSPQPTSDS SKSPKGFHPK PESLKFPSPK SLNPTRPIFK LRADVGIDSR PIGASESSSS GTSTVSSTDK LQQYFQNLDY DKKYGFVEDI
101: DSFTIPKGLS EETIRLISKL KEEPDWMLEF RFKAYAKFLK LEEPKWSDNR YPSINFQDMC YYSAPKKKPT LNSLDEVDPQ LLEYFDKLGV PLTEQKRLAN
201: VAVDAVIDSV SIATTHRKTL EKSGVIFCSI SEAIREYPDL IKKYLGRVVP SDDNYYAALN SAVFSDGSFC YIPKNTRCPM PISTYFRINA METGQFERTL
301: IVAEEGSFVE YLEGCTAPSY DTNQLHAAVV ELYCGKGAEI KYSTVQNWYA GDEQGKGGIY NFVTKRGLCA GDRSKISWTQ VETGSAITWK YPSVVLEGDD
401: SVGEFYSVAL TNNYQQADTG TKMIHKGKNT KSRIISKGIS AGHSRNCYRG LVQVQSKAEG AKNTSTCDSM LIGDKAAANT YPYIQVKNPS AKVEHEASTS
501: KIGEDQLFYF QQRGIDHERA LAAMISGFCR DVFNKLPDEF GAEVNQLMSI KLEGSVG

Arabidopsis Description

ABCI8UPF0051 protein ABCI8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZS97]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.