CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 1
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0116g01910.t01	Wine grape	cytosol, mitochondrion	38.39	50.0
KRH13114	Soybean	cytosol, plastid	35.71	47.62
CDX91226	Canola	cytosol	52.68	25.54
GSMUA_Achr3P14230_001	Banana	cytosol	41.96	18.43
Zm00001d042998_P001	Maize	plastid	36.61	17.37
Zm00001d012465_P001	Maize	plastid	40.18	14.95
GSMUA_Achr1P17690_001	Banana	mitochondrion	40.18	13.43
CDX94573	Canola	plastid	48.21	11.34
CDY16648	Canola	plastid	48.21	11.27
PGSC0003DMT400042503	Potato	plastid	44.64	9.16
Solyc02g080440.2.1	Tomato	plastid	44.64	9.16
PGSC0003DMT400013035	Potato	plastid	44.64	9.12
Solyc03g031700.2.1	Tomato	plastid	44.64	9.12
TraesCS3D01G343800.1	Wheat	plastid	40.18	8.77
TraesCS3B01G382400.1	Wheat	plastid	40.18	8.3
TraesCS3A01G349800.1	Wheat	plastid	40.18	8.27
EES03828	Sorghum	plastid	39.29	8.12
Os01t0830000-01	Rice	plasma membrane, plastid	39.29	8.09
HORVU3Hr1G087860.1	Barley	plastid	40.18	6.89
CDY26899	Canola	plastid	22.32	5.29
CDY32277	Canola	plastid	22.32	5.21

Protein Annotations

EnsemblPlants:CDX97313	EnsemblPlantsGene:GSBRNA2T00104375001	InterPro:SUF_FeS_clus_asmbl_SufBD_sf	PANTHER:PTHR30508	PANTHER:PTHR30508:SF1	ProteinID:CDX97313
ProteinID:CDX97313.1	SignalP:SignalP-noTM	SUPFAM:SSF101960	UniParc:UPI0004EF266A	MapMan:35.1	:

Description

BnaA02g21040D

Coordinates

chrLK031898:+:806262..806827

Molecular Weight (calculated)

12946.1 Da

IEP (calculated)

9.290

GRAVY (calculated)

0.117

Length

112 amino acids

Sequence
(BLAST)

001: MTLWESFTLM LKALPLPTQC LLMTKQLLIP ILTSSYNWFM IEHSNPSARV MRVSQKIGKD QLLYFQQRGI DHQRVLAAMI FRFCREIFNK LPDEFGAEVN
101: QLIGIKLEGS VG

Best Arabidopsis Sequence Match ( AT4G04770.1 )
(BLAST)

001: MASLLANGIS SFSPQPTSDS SKSPKGFHPK PESLKFPSPK SLNPTRPIFK LRADVGIDSR PIGASESSSS GTSTVSSTDK LQQYFQNLDY DKKYGFVEDI
101: DSFTIPKGLS EETIRLISKL KEEPDWMLEF RFKAYAKFLK LEEPKWSDNR YPSINFQDMC YYSAPKKKPT LNSLDEVDPQ LLEYFDKLGV PLTEQKRLAN
201: VAVDAVIDSV SIATTHRKTL EKSGVIFCSI SEAIREYPDL IKKYLGRVVP SDDNYYAALN SAVFSDGSFC YIPKNTRCPM PISTYFRINA METGQFERTL
301: IVAEEGSFVE YLEGCTAPSY DTNQLHAAVV ELYCGKGAEI KYSTVQNWYA GDEQGKGGIY NFVTKRGLCA GDRSKISWTQ VETGSAITWK YPSVVLEGDD
401: SVGEFYSVAL TNNYQQADTG TKMIHKGKNT KSRIISKGIS AGHSRNCYRG LVQVQSKAEG AKNTSTCDSM LIGDKAAANT YPYIQVKNPS AKVEHEASTS
501: KIGEDQLFYF QQRGIDHERA LAAMISGFCR DVFNKLPDEF GAEVNQLMSI KLEGSVG

Arabidopsis Description

ABCI8UPF0051 protein ABCI8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZS97]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.