Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G343800.1 | Wheat | plastid | 71.98 | 91.62 |
| TraesCS3B01G382400.1 | Wheat | plastid | 74.89 | 90.22 |
| TraesCS3A01G349800.1 | Wheat | plastid | 74.89 | 89.89 |
| EES03828 | Sorghum | plastid | 71.21 | 85.79 |
| Os01t0830000-01 | Rice | plasma membrane, plastid | 70.6 | 84.74 |
| GSMUA_Achr3P14230_001 | Banana | cytosol | 32.16 | 82.35 |
| GSMUA_Achr1P17690_001 | Banana | mitochondrion | 41.65 | 81.19 |
| CDX91226 | Canola | cytosol | 26.03 | 73.59 |
| Zm00001d012465_P001 | Maize | plastid | 33.69 | 73.09 |
| Zm00001d042998_P001 | Maize | plastid | 25.11 | 69.49 |
| KRH03586 | Soybean | plastid | 55.9 | 68.87 |
| KRH20223 | Soybean | plastid | 56.36 | 67.65 |
| Bra029516.1-P | Field mustard | plastid | 57.12 | 67.57 |
| Solyc02g080440.2.1 | Tomato | plastid | 55.9 | 66.85 |
| PGSC0003DMT400013035 | Potato | plastid | 56.05 | 66.79 |
| Solyc03g031700.2.1 | Tomato | plastid | 56.05 | 66.79 |
| PGSC0003DMT400042503 | Potato | plastid | 55.74 | 66.67 |
| AT4G04770.1 | Thale cress | plastid | 56.66 | 66.43 |
| CDY16648 | Canola | plastid | 47.32 | 64.51 |
| KRH13114 | Soybean | cytosol, plastid | 8.27 | 64.29 |
| CDX94573 | Canola | plastid | 46.55 | 63.87 |
| VIT_10s0116g01910.t01 | Wine grape | cytosol, mitochondrion | 8.27 | 62.79 |
| VIT_10s0116g01920.t01 | Wine grape | plastid | 48.85 | 62.67 |
| AT5G44316.1 | Thale cress | plastid | 42.42 | 58.94 |
| CDX97313 | Canola | vacuole | 6.89 | 40.18 |
| HORVU3Hr1G004330.1 | Barley | plastid | 13.17 | 16.96 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G087860.1 | EnsemblPlantsGene:HORVU3Hr1G087860 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016226 | InterPro:SUF_FeS_clus_asmbl_SufB | InterPro:SUF_FeS_clus_asmbl_SufBD | InterPro:SUF_FeS_clus_asmbl_SufBD_sf | PANTHER:PTHR30508 |
| PANTHER:PTHR30508:SF1 | PFAM:PF01458 | SEG:seg | SUPFAM:SSF101960 | TIGRFAMs:TIGR01980 | UniParc:UPI000B47EE6C |
| UniProt:A0A287M4P8 | MapMan:7.11.1.1.1.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:622812681..622817396
Molecular Weight (calculated)
71497.8 Da
IEP (calculated)
9.013
GRAVY (calculated)
-0.391
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDEKSVFSS PALLWRRHVS RTPSGAVLRR SAATRPFALQ RGPPWTEPTN AEGTRSRPRA HRPARAVRPC HGPGLSLSRT PPLPPRFSLI PRSPPPPPLP
101: SAHPTPPKFA SASPAATMAA SASTSLFGPC ALTARLGAGR PSRGPRRRVD ARRGRLSVVA VQTGPQKPSP SPAADEAEAL QNLLKREYKY GFVSDFESFS
201: IPKGLSEATV RRISELKAEP AWMLDFRLAA YRRFLTMAEP TWSDNVYSPV DLQSLCFYSA PKTKPKLNSL DEVDPELLKT FDRLGIPLGE QKRLSNVAVD
301: AVIDSTSIAT THREALMAKG VIFCSISEAI REYPDLIKRY IGSIVPPGDN YYAALNSAVF SDGSFCYVPK DTVCPMEIST YFRINDKETG QFERTLIVAD
401: ERSTVSYLEG CTAPAYDSNQ LHAAVVELVC EEGAEIKYST VQNWYAGDEK GKGGIYNFVT KRGRCKGRGS KISWTQVETG SAITWKYPSV ELVGDDTVGE
501: FYSVALTKDY QQADTGTKMI HKGKNSRSRI ISKGISAGKS RNCYRGLVQM NSGAENAYNS SQCDSLLIGD KAAANTYPTI QVGCTSGRVE HEASTSKIGE
601: DQLFYFQQRG IDHEKAVAAM IGGFCRAVFE HLPYEFAQEV DALMNLKLEG SVG
101: SAHPTPPKFA SASPAATMAA SASTSLFGPC ALTARLGAGR PSRGPRRRVD ARRGRLSVVA VQTGPQKPSP SPAADEAEAL QNLLKREYKY GFVSDFESFS
201: IPKGLSEATV RRISELKAEP AWMLDFRLAA YRRFLTMAEP TWSDNVYSPV DLQSLCFYSA PKTKPKLNSL DEVDPELLKT FDRLGIPLGE QKRLSNVAVD
301: AVIDSTSIAT THREALMAKG VIFCSISEAI REYPDLIKRY IGSIVPPGDN YYAALNSAVF SDGSFCYVPK DTVCPMEIST YFRINDKETG QFERTLIVAD
401: ERSTVSYLEG CTAPAYDSNQ LHAAVVELVC EEGAEIKYST VQNWYAGDEK GKGGIYNFVT KRGRCKGRGS KISWTQVETG SAITWKYPSV ELVGDDTVGE
501: FYSVALTKDY QQADTGTKMI HKGKNSRSRI ISKGISAGKS RNCYRGLVQM NSGAENAYNS SQCDSLLIGD KAAANTYPTI QVGCTSGRVE HEASTSKIGE
601: DQLFYFQQRG IDHEKAVAAM IGGFCRAVFE HLPYEFAQEV DALMNLKLEG SVG
001: MASLLANGIS SFSPQPTSDS SKSPKGFHPK PESLKFPSPK SLNPTRPIFK LRADVGIDSR PIGASESSSS GTSTVSSTDK LQQYFQNLDY DKKYGFVEDI
101: DSFTIPKGLS EETIRLISKL KEEPDWMLEF RFKAYAKFLK LEEPKWSDNR YPSINFQDMC YYSAPKKKPT LNSLDEVDPQ LLEYFDKLGV PLTEQKRLAN
201: VAVDAVIDSV SIATTHRKTL EKSGVIFCSI SEAIREYPDL IKKYLGRVVP SDDNYYAALN SAVFSDGSFC YIPKNTRCPM PISTYFRINA METGQFERTL
301: IVAEEGSFVE YLEGCTAPSY DTNQLHAAVV ELYCGKGAEI KYSTVQNWYA GDEQGKGGIY NFVTKRGLCA GDRSKISWTQ VETGSAITWK YPSVVLEGDD
401: SVGEFYSVAL TNNYQQADTG TKMIHKGKNT KSRIISKGIS AGHSRNCYRG LVQVQSKAEG AKNTSTCDSM LIGDKAAANT YPYIQVKNPS AKVEHEASTS
501: KIGEDQLFYF QQRGIDHERA LAAMISGFCR DVFNKLPDEF GAEVNQLMSI KLEGSVG
101: DSFTIPKGLS EETIRLISKL KEEPDWMLEF RFKAYAKFLK LEEPKWSDNR YPSINFQDMC YYSAPKKKPT LNSLDEVDPQ LLEYFDKLGV PLTEQKRLAN
201: VAVDAVIDSV SIATTHRKTL EKSGVIFCSI SEAIREYPDL IKKYLGRVVP SDDNYYAALN SAVFSDGSFC YIPKNTRCPM PISTYFRINA METGQFERTL
301: IVAEEGSFVE YLEGCTAPSY DTNQLHAAVV ELYCGKGAEI KYSTVQNWYA GDEQGKGGIY NFVTKRGLCA GDRSKISWTQ VETGSAITWK YPSVVLEGDD
401: SVGEFYSVAL TNNYQQADTG TKMIHKGKNT KSRIISKGIS AGHSRNCYRG LVQVQSKAEG AKNTSTCDSM LIGDKAAANT YPYIQVKNPS AKVEHEASTS
501: KIGEDQLFYF QQRGIDHERA LAAMISGFCR DVFNKLPDEF GAEVNQLMSI KLEGSVG
Arabidopsis Description
ABCI8UPF0051 protein ABCI8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZS97]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.