Factsheet for HORVU3Hr1G004330.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G050780.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32500.1	HORVU4Hr1G050780.1	AT3G10670.1	15184673

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G032700.1	Wheat	plastid	86.19	92.19
TraesCS3B01G035600.1	Wheat	plastid	86.39	92.02
TraesCS3A01G047200.1	Wheat	plastid	86.0	91.98
Zm00001d008549_P002	Maize	plastid	71.01	74.84
EES02550	Sorghum	plastid	70.41	74.53
Os01t0127300-01	Rice	plasma membrane	69.03	72.61
VIT_02s0012g01060.t01	Wine grape	cytosol	13.21	52.34
VIT_03s0017g01730.t01	Wine grape	mitochondrion	27.02	49.1
GSMUA_Achr10P...	Banana	plastid	46.75	48.37
Solyc08g007010.2.1	Tomato	plastid	44.38	46.39
KRH77216	Soybean	plasma membrane	27.42	46.33
PGSC0003DMT400052824	Potato	plastid	44.18	45.9
KRH28278	Soybean	plastid	40.43	44.96
CDY26899	Canola	plastid	41.22	44.19
Bra010169.1-P	Field mustard	plastid	41.22	43.82
AT1G32500.1	Thale cress	mitochondrion, plastid	40.63	43.37
CDY32277	Canola	plastid	40.83	43.12
VIT_02s0012g01050.t01	Wine grape	plastid	30.18	40.8
KRH63379	Soybean	cytosol	13.81	33.33
HORVU3Hr1G087860.1	Barley	plastid	16.96	13.17

Protein Annotations

MapMan:7.11.1.1.1.3	UniProt:A0A287JZD1	GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987
GO:GO:0010027	GO:GO:0016043	GO:GO:0016226	EnsemblPlantsGene:HORVU3Hr1G004330	EnsemblPlants:HORVU3Hr1G004330.1	PFAM:PF01458
PANTHER:PTHR43575	PANTHER:PTHR43575:SF2	SUPFAM:SSF101960	InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf	InterPro:SUF_FeS_clus_asmbl_SufD
UniParc:UPI000B46966E	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:11267059..11271556

Molecular Weight (calculated)

54454.4 Da

IEP (calculated)

7.540

GRAVY (calculated)

-0.233

Length

507 amino acids

Sequence
(BLAST)

001: RFHQPTRHNP TASPSLPPPL DERNGEASPA AAMSPPSLCS APPRAGPPPP PLLRPRRPAS FSVRASRAAA PSVSDDLVLR IAEQLEDSAP SSPLLAPLRS
101: ASALSLLTTP WPTRRSNEAF RFTDISYLRS LPISTPTRTP GLAPPPPSSD LESHVLFSDG RLVAAAGAHV SALADMPPGH ARDRAAAAIA ASARFSHRDI
201: FYDFNAVGAS DVAVVHVPEG AKMAGDPVHI MFAYSGSDGA SSLMMSNPRV LVIAEKGAEV AIVEEHFGVG EEDGGCYWAN PVVDIIVEEG ARVVHSYVQR
301: QSSAAAHTKW TTVQQNTSSK YEFVEVSTGA RLNRHNLHIQ QLGPETETDL STFHLTSQNK QIHDLHSRLI LDHPRGFSRQ LHKLIACGTG NGIFDGNIQV
401: NRYAQQTDAG QQTKCLLLSP KAVVNVKPNL QIIADDVKCT HGAAISGELD PNELFYFQAR GVNANTATDA LLFSFGAQVI NRIPFKAIEK KALAQLKELL
501: AVSRQSN

Best Arabidopsis Sequence Match ( AT1G32500.1 )
(BLAST)

001: MAAATVLGRL SLIPNLSSKP KLKSNRRTTS TSVSVRAQAS FSDPFVLQLA ESLEDSLSAS PSSSLPLQRI RDSSAETLLS TPWPSRKDEP FRFTDTSLIR
101: SSQIEPISTQ QRNSEILDNL TETQFTNAVI IDGFVSNLTI GPSDLPDGVY FGKYSGLPDE LTNRISEFIG NFDSGDLFWS INGMGAPDLM VIYVPEGCKV
201: ENPIYLRYFS GETGDRESKR LPVSNPRVFV LVEEGGEIGI VEEFVGKDEE GFYWTNPVLE VVVQKNAKLK HSYLQKESMA SAHIKWTFVR QEAESEYELV
301: EVSTGGKLGR HNVHVQQLGP DTLTELTTFH MCVNEQTLDL HSKIILDHPR GASRQLHKCI VAHSSGQAVF DGNVRVNRFA QQTNAGQLTR SLLLKPRATV
401: NIKPNLQIIA DDVKCSHGAA ISDLEEDQLF YFQARGIDLE TARRALISSF GSEVIEKFPN REIRDQARNH VKGLL

Arabidopsis Description

ABCI7At1g32500 [Source:UniProtKB/TrEMBL;Acc:Q058Q9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.