Factsheet for VIT_02s0012g01060.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0017g01730.t01	Wine grape	mitochondrion	79.69	36.56
VIT_10s0116g01910.t01	Wine grape	cytosol, mitochondrion	20.31	30.23
KRH63379	Soybean	cytosol	48.44	29.52
Solyc08g007010.2.1	Tomato	plastid	67.97	17.94
PGSC0003DMT400052824	Potato	plastid	67.97	17.83
KRH28278	Soybean	plastid	63.28	17.76
KRH77216	Soybean	plasma membrane	41.41	17.67
GSMUA_Achr10P...	Banana	plastid	60.94	15.92
TraesCS3D01G032700.1	Wheat	plastid	53.91	14.56
TraesCS3A01G047200.1	Wheat	plastid	53.12	14.35
TraesCS3B01G035600.1	Wheat	plastid	53.12	14.29
Zm00001d008549_P002	Maize	plastid	51.56	13.72
EES02550	Sorghum	plastid	50.78	13.57
HORVU3Hr1G004330.1	Barley	plastid	52.34	13.21
Os01t0127300-01	Rice	plasma membrane	49.22	13.07
VIT_10s0116g01920.t01	Wine grape	plastid	10.16	2.55
VIT_02s0012g01050.t01	Wine grape	plastid	2.34	0.8

Protein Annotations

ArrayExpress:VIT_02s0012g01060	EMBL:FN596247	EnsemblPlants:VIT_02s0012g01060.t01	EnsemblPlantsGene:VIT_02s0012g01060	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016226	InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf
InterPro:SUF_FeS_clus_asmbl_SufD	PANTHER:PTHR43575	PANTHER:PTHR43575:SF2	PFAM:PF01458	ProteinID:CCB57916	ProteinID:CCB57916.1
SUPFAM:SSF101960	UniParc:UPI0002108060	UniProt:F6HTA6	MapMan:7.11.1.1.1.3	:	:

Description

No Description!

Coordinates

chr2:+:7042619..7043585

Molecular Weight (calculated)

14253.1 Da

IEP (calculated)

5.684

GRAVY (calculated)

-0.263

Length

128 amino acids

Sequence
(BLAST)

001: MEISKDLDST ANQHLPPFET PLEYAQRTDA GQLTRSLLLE PRATVNVKPN LQIIADDVKC SHGAAISDLE ENQLFYFLAR GIDLETARKA LIFSFGGEVI
101: ERLPYSSIRK KVETHIKALL EPTLKGSS

Best Arabidopsis Sequence Match ( AT1G32500.1 )
(BLAST)

001: MAAATVLGRL SLIPNLSSKP KLKSNRRTTS TSVSVRAQAS FSDPFVLQLA ESLEDSLSAS PSSSLPLQRI RDSSAETLLS TPWPSRKDEP FRFTDTSLIR
101: SSQIEPISTQ QRNSEILDNL TETQFTNAVI IDGFVSNLTI GPSDLPDGVY FGKYSGLPDE LTNRISEFIG NFDSGDLFWS INGMGAPDLM VIYVPEGCKV
201: ENPIYLRYFS GETGDRESKR LPVSNPRVFV LVEEGGEIGI VEEFVGKDEE GFYWTNPVLE VVVQKNAKLK HSYLQKESMA SAHIKWTFVR QEAESEYELV
301: EVSTGGKLGR HNVHVQQLGP DTLTELTTFH MCVNEQTLDL HSKIILDHPR GASRQLHKCI VAHSSGQAVF DGNVRVNRFA QQTNAGQLTR SLLLKPRATV
401: NIKPNLQIIA DDVKCSHGAA ISDLEEDQLF YFQARGIDLE TARRALISSF GSEVIEKFPN REIRDQARNH VKGLL

Arabidopsis Description

ABCI7At1g32500 [Source:UniProtKB/TrEMBL;Acc:Q058Q9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.