Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G32500.1 | KRH41407 | AT3G10670.1 | 15184673 |
| AT1G32500.1 | KRH60123 | AT3G10670.1 | 15184673 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28278 | Soybean | plastid | 79.0 | 51.97 |
| KRH63379 | Soybean | cytosol | 31.33 | 44.76 |
| VIT_02s0012g01060.t01 | Wine grape | cytosol | 17.67 | 41.41 |
| Solyc08g007010.2.1 | Tomato | plastid | 57.33 | 35.46 |
| AT1G32500.1 | Thale cress | mitochondrion, plastid | 56.0 | 35.37 |
| PGSC0003DMT400052824 | Potato | plastid | 57.33 | 35.25 |
| CDY26899 | Canola | plastid | 55.33 | 35.1 |
| Bra010169.1-P | Field mustard | plastid | 55.33 | 34.8 |
| CDY32277 | Canola | plastid | 55.33 | 34.58 |
| GSMUA_Achr10P... | Banana | plastid | 54.67 | 33.47 |
| EES02550 | Sorghum | plastid | 49.33 | 30.9 |
| Zm00001d008549_P002 | Maize | plastid | 49.33 | 30.77 |
| TraesCS3D01G032700.1 | Wheat | plastid | 46.67 | 29.54 |
| TraesCS3B01G035600.1 | Wheat | plastid | 46.67 | 29.41 |
| TraesCS3A01G047200.1 | Wheat | plastid | 46.33 | 29.32 |
| Os01t0127300-01 | Rice | plasma membrane | 47.0 | 29.25 |
| HORVU3Hr1G004330.1 | Barley | plastid | 46.33 | 27.42 |
| KRH03586 | Soybean | plastid | 17.0 | 9.62 |
| KRH20223 | Soybean | plastid | 17.0 | 9.38 |
| KRH13114 | Soybean | cytosol, plastid | 2.33 | 8.33 |
Protein Annotations
| EMBL:ACUP02000663 | EnsemblPlants:KRH77216 | EnsemblPlantsGene:GLYMA_01G199500 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016226 | InterPro:SUF_FeS_clus_asmbl_SufBD | InterPro:SUF_FeS_clus_asmbl_SufBD_sf | InterPro:SUF_FeS_clus_asmbl_SufD |
| PANTHER:PTHR43575 | PANTHER:PTHR43575:SF2 | PFAM:PF01458 | ProteinID:KRH77216 | ProteinID:KRH77216.1 | SEG:seg |
| SignalP:SignalP-noTM | SUPFAM:SSF101960 | UniParc:UPI0006EDB00F | UniProt:A0A0R0LDY9 | MapMan:7.11.1.1.1.3 | : |
Description
hypothetical protein
Coordinates
chr1:+:53326688..53328314
Molecular Weight (calculated)
33405.3 Da
IEP (calculated)
6.790
GRAVY (calculated)
-0.007
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMELSFLVL RRLLLLCTFP NGDLFWSING IAAPDLTLVY IPEGCHVDIP IHLDYMHPPN TTTDAMQLSN PRFLVVVEKG AQANIIEEFS ALKIMKMTLI
101: GVMPAFEAVI GEGAKLTHSY IQTQSFRSAH IKWTSFLHSA YSITYELTEV STGGKLGRCN LHIQQLGPDT VTELSTLHLS VGDQTQDLHS TLVLDHPRGY
201: SRQLHKCIVT HSQGQAVFDG NIKVNRYAQQ TDAGQLTRSL LLEPCATVNV KLNLQIVADD TARRVLVFAF GREVIDKFPY SSIRDRVGSQ IKNLLDPSSN
101: GVMPAFEAVI GEGAKLTHSY IQTQSFRSAH IKWTSFLHSA YSITYELTEV STGGKLGRCN LHIQQLGPDT VTELSTLHLS VGDQTQDLHS TLVLDHPRGY
201: SRQLHKCIVT HSQGQAVFDG NIKVNRYAQQ TDAGQLTRSL LLEPCATVNV KLNLQIVADD TARRVLVFAF GREVIDKFPY SSIRDRVGSQ IKNLLDPSSN
001: MAAATVLGRL SLIPNLSSKP KLKSNRRTTS TSVSVRAQAS FSDPFVLQLA ESLEDSLSAS PSSSLPLQRI RDSSAETLLS TPWPSRKDEP FRFTDTSLIR
101: SSQIEPISTQ QRNSEILDNL TETQFTNAVI IDGFVSNLTI GPSDLPDGVY FGKYSGLPDE LTNRISEFIG NFDSGDLFWS INGMGAPDLM VIYVPEGCKV
201: ENPIYLRYFS GETGDRESKR LPVSNPRVFV LVEEGGEIGI VEEFVGKDEE GFYWTNPVLE VVVQKNAKLK HSYLQKESMA SAHIKWTFVR QEAESEYELV
301: EVSTGGKLGR HNVHVQQLGP DTLTELTTFH MCVNEQTLDL HSKIILDHPR GASRQLHKCI VAHSSGQAVF DGNVRVNRFA QQTNAGQLTR SLLLKPRATV
401: NIKPNLQIIA DDVKCSHGAA ISDLEEDQLF YFQARGIDLE TARRALISSF GSEVIEKFPN REIRDQARNH VKGLL
101: SSQIEPISTQ QRNSEILDNL TETQFTNAVI IDGFVSNLTI GPSDLPDGVY FGKYSGLPDE LTNRISEFIG NFDSGDLFWS INGMGAPDLM VIYVPEGCKV
201: ENPIYLRYFS GETGDRESKR LPVSNPRVFV LVEEGGEIGI VEEFVGKDEE GFYWTNPVLE VVVQKNAKLK HSYLQKESMA SAHIKWTFVR QEAESEYELV
301: EVSTGGKLGR HNVHVQQLGP DTLTELTTFH MCVNEQTLDL HSKIILDHPR GASRQLHKCI VAHSSGQAVF DGNVRVNRFA QQTNAGQLTR SLLLKPRATV
401: NIKPNLQIIA DDVKCSHGAA ISDLEEDQLF YFQARGIDLE TARRALISSF GSEVIEKFPN REIRDQARNH VKGLL
Arabidopsis Description
ABCI7At1g32500 [Source:UniProtKB/TrEMBL;Acc:Q058Q9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.