Factsheet for TraesCS3A01G047200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G133200.1
TraesCS4B01G171400.1
TraesCS4D01G173500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32500.1	TraesCS4A01G133200.1	AT3G10670.1	15184673
AT1G32500.1	TraesCS4B01G171400.1	AT3G10670.1	15184673
AT1G32500.1	TraesCS4D01G173500.1	AT3G10670.1	15184673

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G032700.1	Wheat	plastid	99.37	99.37
TraesCS3B01G035600.1	Wheat	plastid	98.1	97.69
HORVU3Hr1G004330.1	Barley	plastid	91.98	86.0
EES02550	Sorghum	plastid	75.74	74.95
Zm00001d008549_P002	Maize	plastid	75.53	74.43
Os01t0127300-01	Rice	plasma membrane	73.84	72.61
VIT_02s0012g01060.t01	Wine grape	cytosol	14.35	53.12
VIT_03s0017g01730.t01	Wine grape	mitochondrion	29.32	49.82
GSMUA_Achr10P...	Banana	plastid	50.42	48.78
KRH77216	Soybean	plasma membrane	29.32	46.33
Solyc08g007010.2.1	Tomato	plastid	47.26	46.19
KRH28278	Soybean	plastid	44.3	46.05
PGSC0003DMT400052824	Potato	plastid	47.05	45.7
CDY26899	Canola	plastid	44.94	45.03
Bra010169.1-P	Field mustard	plastid	44.94	44.65
CDY32277	Canola	plastid	44.51	43.96
AT1G32500.1	Thale cress	mitochondrion, plastid	43.88	43.79
VIT_02s0012g01050.t01	Wine grape	plastid	32.91	41.6
KRH63379	Soybean	cytosol	15.19	34.29
TraesCS3A01G349800.1	Wheat	plastid	17.51	15.26

Protein Annotations

MapMan:7.11.1.1.1.3	GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0010027
GO:GO:0016043	GO:GO:0016226	PFAM:PF01458	PANTHER:PTHR43575	PANTHER:PTHR43575:SF2	SUPFAM:SSF101960
InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf	InterPro:SUF_FeS_clus_asmbl_SufD	EnsemblPlantsGene:TraesCS3A01G047200	EnsemblPlants:TraesCS3A01G047200.1	SEG:seg

Description

No Description!

Coordinates

chr3A:+:24996730..25000904

Molecular Weight (calculated)

51116.6 Da

IEP (calculated)

7.103

GRAVY (calculated)

-0.177

Length

474 amino acids

Sequence
(BLAST)

001: MSPPSLCAAP PRAGPPPPPL LRLRRRAASS VAASRAAAPS VSDDLVLRIA EQLEDAAPSS PLLDPLRSAS ALSLLTTPWP TRRSNEAFRF TDISYLRSLP
101: ISTPTRTPGL APPPPSSDLE SHVLFSDGRL VAASGAHVSA LADMPPGHAR DRAAAAVAAS ARFSHRDIFY DFNAVGASDV AVVYVPEWAK MADDPVHIMF
201: AYSGSDGASL MMSNPRVLVI AEKGAEVAIV EEHFGAGEED GGCYWANPVV DIIVEEGARV VHSYVQRQSP AAAHTKWTTV QQNTSSKYEF VEVSTGARLN
301: RHNLHIQQLG PETETELSTF HLTSQNKQIH DLHSRLILDH PRGFSRQLHK LIACGTGNGI FDGNIQVNRY AQQTDAGQQT KCLLLSPKAV VNVKPNLQII
401: ADDVKCTHGA AISGDLDPNE LFYFQARGVD AKTATDALLF SFGAQVINRI PFKAVEKKAL AQLKELLAVS RQNN

Best Arabidopsis Sequence Match ( AT1G32500.1 )
(BLAST)

001: MAAATVLGRL SLIPNLSSKP KLKSNRRTTS TSVSVRAQAS FSDPFVLQLA ESLEDSLSAS PSSSLPLQRI RDSSAETLLS TPWPSRKDEP FRFTDTSLIR
101: SSQIEPISTQ QRNSEILDNL TETQFTNAVI IDGFVSNLTI GPSDLPDGVY FGKYSGLPDE LTNRISEFIG NFDSGDLFWS INGMGAPDLM VIYVPEGCKV
201: ENPIYLRYFS GETGDRESKR LPVSNPRVFV LVEEGGEIGI VEEFVGKDEE GFYWTNPVLE VVVQKNAKLK HSYLQKESMA SAHIKWTFVR QEAESEYELV
301: EVSTGGKLGR HNVHVQQLGP DTLTELTTFH MCVNEQTLDL HSKIILDHPR GASRQLHKCI VAHSSGQAVF DGNVRVNRFA QQTNAGQLTR SLLLKPRATV
401: NIKPNLQIIA DDVKCSHGAA ISDLEEDQLF YFQARGIDLE TARRALISSF GSEVIEKFPN REIRDQARNH VKGLL

Arabidopsis Description

ABCI7At1g32500 [Source:UniProtKB/TrEMBL;Acc:Q058Q9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.