CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG39439

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32500.1	KXG39439	AT3G10670.1	15184673

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008549_P002	Maize	plastid	94.15	93.76
TraesCS3A01G047200.1	Wheat	plastid	74.95	75.74
TraesCS3B01G035600.1	Wheat	plastid	74.95	75.42
TraesCS3D01G032700.1	Wheat	plastid	74.53	75.32
Os01t0127300-01	Rice	plasma membrane	74.11	73.65
HORVU3Hr1G004330.1	Barley	plastid	74.53	70.41
VIT_02s0012g01060.t01	Wine grape	cytosol	13.57	50.78
KRH77216	Soybean	plasma membrane	30.9	49.33
VIT_03s0017g01730.t01	Wine grape	mitochondrion	27.97	48.03
GSMUA_Achr10P...	Banana	plastid	49.06	47.96
KRH28278	Soybean	plastid	44.89	47.15
CDY26899	Canola	plastid	44.26	44.82
Bra010169.1-P	Field mustard	plastid	44.47	44.65
CDY32277	Canola	plastid	44.05	43.96
Solyc08g007010.2.1	Tomato	plastid	44.47	43.92
PGSC0003DMT400052824	Potato	plastid	44.47	43.65
AT1G32500.1	Thale cress	mitochondrion, plastid	43.01	43.37
VIT_02s0012g01050.t01	Wine grape	plastid	32.78	41.87
KRH63379	Soybean	cytosol	14.61	33.33
EES03828	Sorghum	plastid	17.54	15.5

Protein Annotations

MapMan:7.11.1.1.1.3	EntrezGene:8073352	UniProt:C5XQU8	EnsemblPlants:EES02550	ProteinID:EES02550	ProteinID:EES02550.1
GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0010027	GO:GO:0016043
GO:GO:0016226	PFAM:PF01458	PANTHER:PTHR43575	PANTHER:PTHR43575:SF2	EnsemblPlantsGene:SORBI_3003G085000	SUPFAM:SSF101960
InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf	InterPro:SUF_FeS_clus_asmbl_SufD	unigene:Sbi.2046	UniParc:UPI0001A84BCE	RefSeq:XP_002457430.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:7336845..7340501

Molecular Weight (calculated)

51894.6 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.090

Length

479 amino acids

Sequence
(BLAST)

001: MSSPSPLCAA SCSTALRAPP PLLRFRRSSA PVSASVARAA PAVSDDLVLR IAEQLEDSVT STSPLLDPLR SASALSLLST PWPTRRSSEA FRFTDISYLR
101: SLPISLPSRE PDLALPSSPF SSHVLFSDGI LLSSSGAHVS TLADLPPGRA RDRAAAALAA SAEFAHKDLF YDFNAVGARD VVVVHVPEGV KMADDPIHIL
201: FAYTNSGAGS MLMSNPRVLV VAEKAAEVAI VEEHFGAGEE GGCYWANPVA EIIIDEGARV VHSYVQQQSF AAAHTKWTVV KQDTTSKYEF VEVSTGAKLN
301: RHNLHIEQLG PETETELSTL HLTSQNKQIH DLHSRLILDH PRGFSRQLHK CIACGTGNSI FDGNIKVNRY AQQTDAGQET KCLILSPKAL VNVKPNLQII
401: ADDVKCTHGA AISGELDPNE LFYFQARGIN TETATDALLY FFGAHVIKRI PFKPVSEKAL VQFKELLASS RQTTDKLHS

Best Arabidopsis Sequence Match ( AT1G32500.1 )
(BLAST)

001: MAAATVLGRL SLIPNLSSKP KLKSNRRTTS TSVSVRAQAS FSDPFVLQLA ESLEDSLSAS PSSSLPLQRI RDSSAETLLS TPWPSRKDEP FRFTDTSLIR
101: SSQIEPISTQ QRNSEILDNL TETQFTNAVI IDGFVSNLTI GPSDLPDGVY FGKYSGLPDE LTNRISEFIG NFDSGDLFWS INGMGAPDLM VIYVPEGCKV
201: ENPIYLRYFS GETGDRESKR LPVSNPRVFV LVEEGGEIGI VEEFVGKDEE GFYWTNPVLE VVVQKNAKLK HSYLQKESMA SAHIKWTFVR QEAESEYELV
301: EVSTGGKLGR HNVHVQQLGP DTLTELTTFH MCVNEQTLDL HSKIILDHPR GASRQLHKCI VAHSSGQAVF DGNVRVNRFA QQTNAGQLTR SLLLKPRATV
401: NIKPNLQIIA DDVKCSHGAA ISDLEEDQLF YFQARGIDLE TARRALISSF GSEVIEKFPN REIRDQARNH VKGLL

Arabidopsis Description

ABCI7At1g32500 [Source:UniProtKB/TrEMBL;Acc:Q058Q9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.