Factsheet for Os01t0127300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 8
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0332700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32500.1	Os03t0332700-01	AT3G10670.1	15184673

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02550	Sorghum	plastid	73.65	74.11
TraesCS3D01G032700.1	Wheat	plastid	72.82	74.05
TraesCS3A01G047200.1	Wheat	plastid	72.61	73.84
TraesCS3B01G035600.1	Wheat	plastid	72.61	73.53
Zm00001d008549_P002	Maize	plastid	73.03	73.18
HORVU3Hr1G004330.1	Barley	plastid	72.61	69.03
VIT_02s0012g01060.t01	Wine grape	cytosol	13.07	49.22
GSMUA_Achr10P...	Banana	plastid	49.17	48.37
KRH77216	Soybean	plasma membrane	29.25	47.0
VIT_03s0017g01730.t01	Wine grape	mitochondrion	26.56	45.88
KRH28278	Soybean	plastid	41.7	44.08
Solyc08g007010.2.1	Tomato	plastid	43.78	43.51
PGSC0003DMT400052824	Potato	plastid	43.57	43.03
CDY26899	Canola	plastid	41.91	42.71
Bra010169.1-P	Field mustard	plastid	41.91	42.35
AT1G32500.1	Thale cress	mitochondrion, plastid	41.08	41.68
CDY32277	Canola	plastid	41.49	41.67
VIT_02s0012g01050.t01	Wine grape	plastid	30.91	39.73
KRH63379	Soybean	cytosol	13.69	31.43
Os01t0830000-01	Rice	plasma membrane, plastid	17.01	15.07

Protein Annotations

EntrezGene:4325986	MapMan:7.11.1.1.1.3	EMBL:AK068846	ProteinID:BAD52546.1	ProteinID:BAF03816.1	ProteinID:BAS70183.1
GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0010027	GO:GO:0016043
GO:GO:0016226	EnsemblPlantsGene:Os01g0127300	EnsemblPlants:Os01t0127300-01	PFAM:PF01458	PANTHER:PTHR43575	PANTHER:PTHR43575:SF2
UniProt:Q5ZDZ8	SUPFAM:SSF101960	InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf	InterPro:SUF_FeS_clus_asmbl_SufD	UniParc:UPI0000446A80
RefSeq:XP_015621586.1	SEG:seg	:	:	:	:

Description

ABC TRANSPORTER I FAMILY MEMBER 4SufBD family protein. (Os01t0127300-01)

Coordinates

chr1:-:1504037..1508057

Molecular Weight (calculated)

51617.0 Da

IEP (calculated)

6.858

GRAVY (calculated)

-0.094

Length

482 amino acids

Sequence
(BLAST)

001: MSSPSPALCA AASCSTPLRV ASPVVRFRRP GAPAPVVSAA RASSAAVPAV SDDLVLRIAE QLEDSVAASS PLLDPLRSAS ALSLLSTRWP TRRSNEAYRF
101: TDISYLRSLP ISLPSRDAPA VAPPASPYAS HVHFSDGVLT SSSGAHVSAL ADLPPGHVRD RAAAALAASA GFADKDLFFD FNAVGAKDVV VVHVPEGVSM
201: ADDPVHIMFS YSGCGDGSMM MSNPRVLVVA EKGAEVAIIE EHFGQEDGGC YWANPVMEII VEEDAKVVHS YVQQQSFAAA HTKWTVVQQN TSSNYEFVEV
301: SIGARLNRHN LHVQQLGPET NTQLSTFHFS AQNKQIHDLH SKLILDHPRG RSQQIHRLIA SGTGNGIFDG NIKVNRYAQQ TDAGQETKCL LLSSKALVNV
401: KPNLQIIADD VKCTHGAAIS GEHDPNAIYF LQARGIDAKT AADALNFAFG AHVINQIPFK PIEKKTLAHF KALLASSRQN DE

Best Arabidopsis Sequence Match ( AT1G32500.1 )
(BLAST)

001: MAAATVLGRL SLIPNLSSKP KLKSNRRTTS TSVSVRAQAS FSDPFVLQLA ESLEDSLSAS PSSSLPLQRI RDSSAETLLS TPWPSRKDEP FRFTDTSLIR
101: SSQIEPISTQ QRNSEILDNL TETQFTNAVI IDGFVSNLTI GPSDLPDGVY FGKYSGLPDE LTNRISEFIG NFDSGDLFWS INGMGAPDLM VIYVPEGCKV
201: ENPIYLRYFS GETGDRESKR LPVSNPRVFV LVEEGGEIGI VEEFVGKDEE GFYWTNPVLE VVVQKNAKLK HSYLQKESMA SAHIKWTFVR QEAESEYELV
301: EVSTGGKLGR HNVHVQQLGP DTLTELTTFH MCVNEQTLDL HSKIILDHPR GASRQLHKCI VAHSSGQAVF DGNVRVNRFA QQTNAGQLTR SLLLKPRATV
401: NIKPNLQIIA DDVKCSHGAA ISDLEEDQLF YFQARGIDLE TARRALISSF GSEVIEKFPN REIRDQARNH VKGLL

Arabidopsis Description

ABCI7At1g32500 [Source:UniProtKB/TrEMBL;Acc:Q058Q9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.