Factsheet for Os01t0830000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

plastid: 17189339
plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G343800.1	Wheat	plastid	83.64	88.69
TraesCS3A01G349800.1	Wheat	plastid	86.95	86.95
TraesCS3B01G382400.1	Wheat	plastid	86.58	86.9
EES03828	Sorghum	plastid	86.21	86.53
GSMUA_Achr3P14230_001	Banana	cytosol	38.24	81.57
GSMUA_Achr1P17690_001	Banana	mitochondrion	50.18	81.49
Zm00001d012465_P001	Maize	plastid	40.99	74.09
CDX91226	Canola	cytosol	30.88	72.73
HORVU3Hr1G087860.1	Barley	plastid	84.74	70.6
Zm00001d042998_P001	Maize	plastid	30.33	69.92
KRH03586	Soybean	plastid	67.83	69.62
Bra029516.1-P	Field mustard	plastid	70.04	69.02
Solyc02g080440.2.1	Tomato	plastid	68.38	68.13
KRH20223	Soybean	plastid	68.01	68.01
PGSC0003DMT400042503	Potato	plastid	68.01	67.77
PGSC0003DMT400013035	Potato	plastid	67.83	67.34
Solyc03g031700.2.1	Tomato	plastid	67.83	67.34
AT4G04770.1	Thale cress	plastid	68.38	66.79
CDY16648	Canola	plastid	58.27	66.18
CDX94573	Canola	plastid	57.54	65.76
VIT_10s0116g01920.t01	Wine grape	plastid	60.29	64.44
KRH13114	Soybean	cytosol, plastid	9.93	64.29
VIT_10s0116g01910.t01	Wine grape	cytosol, mitochondrion	9.74	61.63
AT5G44316.1	Thale cress	plastid	52.21	60.43
CDX97313	Canola	vacuole	8.09	39.29
Os01t0127300-01	Rice	plasma membrane	15.07	17.01

Protein Annotations

EntrezGene:4327425	MapMan:7.11.1.1.1.1	EMBL:AK121100	ProteinID:BAB68118.1	ProteinID:BAB89586.1	ProteinID:BAF06607.1
ProteinID:BAS75047.1	ProteinID:EAZ14026.1	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016226	EnsemblPlantsGene:Os01g0830000	EnsemblPlants:Os01t0830000-01	PFAM:PF01458	PANTHER:PTHR30508
PANTHER:PTHR30508:SF1	UniProt:Q941V2	SUPFAM:SSF101960	InterPro:SUF_FeS_clus_asmbl_SufB	InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf
TIGRFAMs:TIGR01980	UniParc:UPI00000A5D10	RefSeq:XP_015651045.1	SEG:seg	:	:

Description

ABC TRANSPORTER I FAMILY MEMBER 5Similar to Plastid sufB (Fragment). (Os01t0830000-01)

Coordinates

chr1:-:35505513..35508520

Molecular Weight (calculated)

59847.5 Da

IEP (calculated)

6.281

GRAVY (calculated)

-0.329

Length

544 amino acids

Sequence
(BLAST)

001: MAAAAASSTP LFSPCCAAAT AKLGAACPSS YGSRRRPCTR RGRLSVVAVQ TGPQKPSPSS SSQAGTESET LQNLLKREYK YGFVSDFESF SIPKGLSEAT
101: VRRISELKAE PAWMLDFRLA AYRRFLTMVQ PTWSDNVYEP VDLQSICYYS APKTKPKLNS LDEVDPELLN TFDRLGIPLS EQKRLANVAV DAVIDSTSIA
201: TTHREELMKK GVIFCSISEA IREYPDLVKR YLGSVVPPAD NYYAALNSAV FSDGSFCYVP KDTVCPMEIS TYFRINDKET GQFERTLIVA DERSTVSYLE
301: GCTAPAYDSN QLHAAVVELV CEEQAEIKYS TVQNWYSGDE EGKGGIYNFV TKRGRCKGRG SKISWTQVET GSAITWKYPS VELLGDDTVG EFYSVALTKD
401: YQQADTGTKM IHKGKNSRSR IISKGISAGK SRNCYRGLVQ INSGAENAYN SSQCDSLLIG DNAAANTYPT IQVGCISSRV EHEASTSKIG EDQLFYFQQR
501: GIDHEKAVAA MIGGFCRAVF ENLPYEFAHE MDALMNLKLE GSVG

Best Arabidopsis Sequence Match ( AT4G04770.1 )
(BLAST)

001: MASLLANGIS SFSPQPTSDS SKSPKGFHPK PESLKFPSPK SLNPTRPIFK LRADVGIDSR PIGASESSSS GTSTVSSTDK LQQYFQNLDY DKKYGFVEDI
101: DSFTIPKGLS EETIRLISKL KEEPDWMLEF RFKAYAKFLK LEEPKWSDNR YPSINFQDMC YYSAPKKKPT LNSLDEVDPQ LLEYFDKLGV PLTEQKRLAN
201: VAVDAVIDSV SIATTHRKTL EKSGVIFCSI SEAIREYPDL IKKYLGRVVP SDDNYYAALN SAVFSDGSFC YIPKNTRCPM PISTYFRINA METGQFERTL
301: IVAEEGSFVE YLEGCTAPSY DTNQLHAAVV ELYCGKGAEI KYSTVQNWYA GDEQGKGGIY NFVTKRGLCA GDRSKISWTQ VETGSAITWK YPSVVLEGDD
401: SVGEFYSVAL TNNYQQADTG TKMIHKGKNT KSRIISKGIS AGHSRNCYRG LVQVQSKAEG AKNTSTCDSM LIGDKAAANT YPYIQVKNPS AKVEHEASTS
501: KIGEDQLFYF QQRGIDHERA LAAMISGFCR DVFNKLPDEF GAEVNQLMSI KLEGSVG

Arabidopsis Description

ABCI8UPF0051 protein ABCI8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZS97]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.