Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16648 | Canola | plastid | 77.87 | 76.41 |
| CDX94573 | Canola | plastid | 77.02 | 76.05 |
| VIT_10s0116g01910.t01 | Wine grape | cytosol, mitochondrion | 13.62 | 74.42 |
| KRH13114 | Soybean | cytosol, plastid | 12.98 | 72.62 |
| GSMUA_Achr1P17690_001 | Banana | mitochondrion | 50.0 | 70.15 |
| AT4G04770.1 | Thale cress | plastid | 80.64 | 68.04 |
| Bra029516.1-P | Field mustard | plastid | 78.09 | 66.49 |
| KRH03586 | Soybean | plastid | 66.38 | 58.87 |
| KRH20223 | Soybean | plastid | 67.66 | 58.46 |
| Solyc02g080440.2.1 | Tomato | plastid | 67.45 | 58.06 |
| PGSC0003DMT400042503 | Potato | plastid | 67.23 | 57.88 |
| Solyc03g031700.2.1 | Tomato | plastid | 66.81 | 57.3 |
| PGSC0003DMT400013035 | Potato | plastid | 66.17 | 56.75 |
| GSMUA_Achr3P14230_001 | Banana | cytosol | 30.21 | 55.69 |
| TraesCS3D01G343800.1 | Wheat | plastid | 59.15 | 54.19 |
| Os01t0830000-01 | Rice | plasma membrane, plastid | 60.43 | 52.21 |
| TraesCS3A01G349800.1 | Wheat | plastid | 60.0 | 51.84 |
| VIT_10s0116g01920.t01 | Wine grape | plastid | 55.96 | 51.67 |
| TraesCS3B01G382400.1 | Wheat | plastid | 59.57 | 51.66 |
| EES03828 | Sorghum | plastid | 59.57 | 51.66 |
| Zm00001d012465_P001 | Maize | plastid | 27.45 | 42.86 |
| HORVU3Hr1G087860.1 | Barley | plastid | 58.94 | 42.42 |
| Zm00001d042998_P001 | Maize | plastid | 19.57 | 38.98 |
| AT1G32500.1 | Thale cress | mitochondrion, plastid | 16.17 | 16.0 |
Protein Annotations
| MapMan:35.1 | EntrezGene:834456 | EMBL:AB011475 | ProteinID:AED95095.1 | ArrayExpress:AT5G44316 | EnsemblPlantsGene:AT5G44316 |
| RefSeq:AT5G44316 | TAIR:AT5G44316 | RefSeq:AT5G44316-TAIR-G | EnsemblPlants:AT5G44316.1 | TAIR:AT5G44316.1 | Unigene:At.55351 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016226 |
| RefSeq:NP_680390.1 | PFAM:PF01458 | PANTHER:PTHR30508 | PANTHER:PTHR30508:SF1 | UniProt:Q3E8H7 | SUPFAM:SSF101960 |
| InterPro:SUF_FeS_clus_asmbl_SufBD | InterPro:SUF_FeS_clus_asmbl_SufBD_sf | UniParc:UPI0000162814 | : | : | : |
Description
ABCI9Putative UPF0051 protein ABCI9 [Source:UniProtKB/Swiss-Prot;Acc:Q3E8H7]
Coordinates
chr5:+:17852911..17854521
Molecular Weight (calculated)
53088.9 Da
IEP (calculated)
6.117
GRAVY (calculated)
-0.424
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLFAIGFS KFSPQPTSDY SKLLKVFHPK PYSLKFLFLK TLNPTRFFKV RANDGTEPSD KLQQYFQNQD YDKKYGFLEN IDSFTIPKGL SEETIRLISK
101: LKKEPAWILE YRLKAYAKFL KLEEPKWSDN RYPLLDLQDM CFYSAPKKKP TLNSSDIADE ADDPKLLEEF DRLDVPLTKK KKCSPKVAVD AVYNSESIAI
201: TNKEPLEKSG VIFCSISEAI RKYPDLIKKY LGRVVPSDDN YYAALNTAVF SDGSFCYIPK NTRCPMPLSS YFRMNSIENT GQFERTLIVA EEGSFVEYSE
301: GCTAISHDKN QLHAAVVELY CAEGAEIKYS TRGLCAGDRS KISWTQVEKG FAITWKYPSV VLEGDDSVGE AENARNTSTC DSMLIGDNAA ANTYPYIQVK
401: NPSARIEHEA STSKIGEDQI FYFQQRGIDH ERALAAMISG FCRDVFNKLP NEFGAEVNQL LSIKLEGSVG
101: LKKEPAWILE YRLKAYAKFL KLEEPKWSDN RYPLLDLQDM CFYSAPKKKP TLNSSDIADE ADDPKLLEEF DRLDVPLTKK KKCSPKVAVD AVYNSESIAI
201: TNKEPLEKSG VIFCSISEAI RKYPDLIKKY LGRVVPSDDN YYAALNTAVF SDGSFCYIPK NTRCPMPLSS YFRMNSIENT GQFERTLIVA EEGSFVEYSE
301: GCTAISHDKN QLHAAVVELY CAEGAEIKYS TRGLCAGDRS KISWTQVEKG FAITWKYPSV VLEGDDSVGE AENARNTSTC DSMLIGDNAA ANTYPYIQVK
401: NPSARIEHEA STSKIGEDQI FYFQQRGIDH ERALAAMISG FCRDVFNKLP NEFGAEVNQL LSIKLEGSVG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.