Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc03g078620.1.1 | |
| Solyc04g055130.1.1 | |
| Solyc04g055140.1.1 | |
| Solyc04g055150.1.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400042503 | Potato | plastid | 97.99 | 97.99 |
| Solyc03g031700.2.1 | Tomato | plastid | 87.91 | 87.59 |
| GSMUA_Achr3P14230_001 | Banana | cytosol | 38.46 | 82.35 |
| VIT_10s0116g01910.t01 | Wine grape | cytosol, mitochondrion | 12.82 | 81.4 |
| CDX91226 | Canola | cytosol | 33.52 | 79.22 |
| KRH13114 | Soybean | cytosol, plastid | 12.09 | 78.57 |
| KRH20223 | Soybean | plastid | 77.47 | 77.76 |
| Bra029516.1-P | Field mustard | plastid | 78.02 | 77.17 |
| KRH03586 | Soybean | plastid | 74.54 | 76.79 |
| GSMUA_Achr1P17690_001 | Banana | mitochondrion | 46.89 | 76.42 |
| AT4G04770.1 | Thale cress | plastid | 77.11 | 75.58 |
| VIT_10s0116g01920.t01 | Wine grape | plastid | 68.86 | 73.87 |
| TraesCS3D01G343800.1 | Wheat | plastid | 65.38 | 69.59 |
| Os01t0830000-01 | Rice | plasma membrane, plastid | 68.13 | 68.38 |
| EES03828 | Sorghum | plastid | 67.22 | 67.71 |
| AT5G44316.1 | Thale cress | plastid | 58.06 | 67.45 |
| TraesCS3A01G349800.1 | Wheat | plastid | 66.85 | 67.1 |
| TraesCS3B01G382400.1 | Wheat | plastid | 66.48 | 66.97 |
| Zm00001d012465_P001 | Maize | plastid | 34.8 | 63.12 |
| Zm00001d042998_P001 | Maize | plastid | 24.54 | 56.78 |
| HORVU3Hr1G087860.1 | Barley | plastid | 66.85 | 55.9 |
| CDX97313 | Canola | vacuole | 9.16 | 44.64 |
| Solyc08g007010.2.1 | Tomato | plastid | 15.57 | 17.53 |
Protein Annotations
| EnsemblPlants:Solyc02g080440.2.1 | EnsemblPlantsGene:Solyc02g080440.2 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016226 | InterPro:SUF_FeS_clus_asmbl_SufB | InterPro:SUF_FeS_clus_asmbl_SufBD | InterPro:SUF_FeS_clus_asmbl_SufBD_sf | PANTHER:PTHR30508 |
| PANTHER:PTHR30508:SF1 | PFAM:PF01458 | SUPFAM:SSF101960 | TIGRFAMs:TIGR01980 | UniParc:UPI0002769026 | UniProt:K4B9R5 |
| MapMan:7.11.1.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:44653949..44658667
Molecular Weight (calculated)
61128.1 Da
IEP (calculated)
5.633
GRAVY (calculated)
-0.464
Length
546 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLLTNGIS HFCPQSIAEQ PKLPKGYNFL PNSPGPKISN PGNFKIKAAD AKATVEVPGK ESSLSISNEG DPLQKFLKRD YKWGFNENIE SFALPKGLSE
101: DTIRLISSRK NEPEWMLEYR LKSYEKFVKM KEPKWSDNQY PEIDFQNICY YSEPKKKPTL DSLDEADPEL VRYFDKLGIP LNERNRLANV AVDAVLDSVS
201: IATTHRKTLE KSGVIFCSIS EAIREYPDLV RKYLFRVVPP EDNFYAALNS AVFSDGSFVY IPKNTKCPMQ ISTYFRINAM ETGQFERTLI VADEGSFVEY
301: LEGCTAPSYD TNQLHAAVVE LYCHEGAEIK YSTVQNWYAG DEEGRGGIYN FVTKRGICAG ARSKISWTQV ETGSAITWKY PSVVLEGDES VGEFYSVALT
401: NNYQQADTGT KMVHKGKNTR SRIISKGISA GNSRNCYRGL VQVLSSAENA RNSSQCDSML IGDKAAANTY PYIQAKNPSA RIEHEATTSK IGEDQLFYFQ
501: QRGIDYEKAM AAMISGFCRD VFNELPDEFG AEVNQLMSLK LEGSVG
101: DTIRLISSRK NEPEWMLEYR LKSYEKFVKM KEPKWSDNQY PEIDFQNICY YSEPKKKPTL DSLDEADPEL VRYFDKLGIP LNERNRLANV AVDAVLDSVS
201: IATTHRKTLE KSGVIFCSIS EAIREYPDLV RKYLFRVVPP EDNFYAALNS AVFSDGSFVY IPKNTKCPMQ ISTYFRINAM ETGQFERTLI VADEGSFVEY
301: LEGCTAPSYD TNQLHAAVVE LYCHEGAEIK YSTVQNWYAG DEEGRGGIYN FVTKRGICAG ARSKISWTQV ETGSAITWKY PSVVLEGDES VGEFYSVALT
401: NNYQQADTGT KMVHKGKNTR SRIISKGISA GNSRNCYRGL VQVLSSAENA RNSSQCDSML IGDKAAANTY PYIQAKNPSA RIEHEATTSK IGEDQLFYFQ
501: QRGIDYEKAM AAMISGFCRD VFNELPDEFG AEVNQLMSLK LEGSVG
001: MASLLANGIS SFSPQPTSDS SKSPKGFHPK PESLKFPSPK SLNPTRPIFK LRADVGIDSR PIGASESSSS GTSTVSSTDK LQQYFQNLDY DKKYGFVEDI
101: DSFTIPKGLS EETIRLISKL KEEPDWMLEF RFKAYAKFLK LEEPKWSDNR YPSINFQDMC YYSAPKKKPT LNSLDEVDPQ LLEYFDKLGV PLTEQKRLAN
201: VAVDAVIDSV SIATTHRKTL EKSGVIFCSI SEAIREYPDL IKKYLGRVVP SDDNYYAALN SAVFSDGSFC YIPKNTRCPM PISTYFRINA METGQFERTL
301: IVAEEGSFVE YLEGCTAPSY DTNQLHAAVV ELYCGKGAEI KYSTVQNWYA GDEQGKGGIY NFVTKRGLCA GDRSKISWTQ VETGSAITWK YPSVVLEGDD
401: SVGEFYSVAL TNNYQQADTG TKMIHKGKNT KSRIISKGIS AGHSRNCYRG LVQVQSKAEG AKNTSTCDSM LIGDKAAANT YPYIQVKNPS AKVEHEASTS
501: KIGEDQLFYF QQRGIDHERA LAAMISGFCR DVFNKLPDEF GAEVNQLMSI KLEGSVG
101: DSFTIPKGLS EETIRLISKL KEEPDWMLEF RFKAYAKFLK LEEPKWSDNR YPSINFQDMC YYSAPKKKPT LNSLDEVDPQ LLEYFDKLGV PLTEQKRLAN
201: VAVDAVIDSV SIATTHRKTL EKSGVIFCSI SEAIREYPDL IKKYLGRVVP SDDNYYAALN SAVFSDGSFC YIPKNTRCPM PISTYFRINA METGQFERTL
301: IVAEEGSFVE YLEGCTAPSY DTNQLHAAVV ELYCGKGAEI KYSTVQNWYA GDEQGKGGIY NFVTKRGLCA GDRSKISWTQ VETGSAITWK YPSVVLEGDD
401: SVGEFYSVAL TNNYQQADTG TKMIHKGKNT KSRIISKGIS AGHSRNCYRG LVQVQSKAEG AKNTSTCDSM LIGDKAAANT YPYIQVKNPS AKVEHEASTS
501: KIGEDQLFYF QQRGIDHERA LAAMISGFCR DVFNKLPDEF GAEVNQLMSI KLEGSVG
Arabidopsis Description
ABCI8UPF0051 protein ABCI8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZS97]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.