Factsheet for GSMUA_Achr10P14420_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr8P32690_001
GSMUA_Achr9P00290_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32500.1	GSMUA_Achr8P32690_001	AT3G10670.1	15184673
AT1G32500.1	GSMUA_Achr9P00290_001	AT3G10670.1	15184673

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0012g01060.t01	Wine grape	cytosol	15.92	60.94
VIT_03s0017g01730.t01	Wine grape	mitochondrion	32.45	56.99
KRH28278	Soybean	plastid	51.84	55.7
CDY26899	Canola	plastid	53.67	55.6
Bra010169.1-P	Field mustard	plastid	53.67	55.14
CDY32277	Canola	plastid	53.88	55.0
AT1G32500.1	Thale cress	mitochondrion, plastid	53.06	54.74
KRH77216	Soybean	plasma membrane	33.47	54.67
Solyc08g007010.2.1	Tomato	plastid	54.08	54.64
PGSC0003DMT400052824	Potato	plastid	54.08	54.3
VIT_02s0012g01050.t01	Wine grape	plastid	41.43	54.13
TraesCS3D01G032700.1	Wheat	plastid	48.98	50.63
TraesCS3A01G047200.1	Wheat	plastid	48.78	50.42
TraesCS3B01G035600.1	Wheat	plastid	48.78	50.21
Os01t0127300-01	Rice	plasma membrane	48.37	49.17
EES02550	Sorghum	plastid	47.96	49.06
Zm00001d008549_P002	Maize	plastid	47.76	48.65
HORVU3Hr1G004330.1	Barley	plastid	48.37	46.75
KRH63379	Soybean	cytosol	17.35	40.48
GSMUA_Achr3P14230_001	Banana	cytosol	11.22	21.57
GSMUA_Achr1P17690_001	Banana	mitochondrion	12.04	17.61
GSMUA_Achr3P00110_001	Banana	mitochondrion	3.67	15.65

Protein Annotations

MapMan:7.11.1.1.1.3	GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0010027
GO:GO:0016043	GO:GO:0016226	EnsemblPlantsGene:GSMUA_Achr10G14420_001	EnsemblPlants:GSMUA_Achr10P14420_001	EnsemblPlants:GSMUA_Achr10T14420_001	UniProt:M0RI68
PFAM:PF01458	PANTHER:PTHR43575	PANTHER:PTHR43575:SF2	SUPFAM:SSF101960	InterPro:SUF_FeS_clus_asmbl_SufBD	InterPro:SUF_FeS_clus_asmbl_SufBD_sf
InterPro:SUF_FeS_clus_asmbl_SufD	TIGRFAMs:TIGR01981	UniParc:UPI000294E2F3	SEG:seg	:	:

Description

Protein ABCI7, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G14420_001]

Coordinates

chr10:-:22689005..22692229

Molecular Weight (calculated)

53006.1 Da

IEP (calculated)

6.866

GRAVY (calculated)

-0.078

Length

490 amino acids

Sequence
(BLAST)

001: MSYCSSSVPI APPPPTTLTP LRRRCRAAAL TLPTTARAHR TAAARAALSD PFVLEIAEKF EDSLSSSDAA ASPLPLQKLR DSASQSLLSK RWPSTKDEPF
101: RFTNLSFLRS SLLLPAPSPT FPLDPALDSP SPHVLAIVDG HVAPSLSRLS ALPSGVFAGS VSALPPGPTV DRVLTALAQG FGDGDLFWDL NGVGAPDMAV
201: IFVPAGVRVV DEPVHVQICY SEGGEVGSER LPVSSPRVLV VVEKGAEVSF VEEHMGIGGS EERCYWANSV MEILIGEGGK VVHSYVQRQS VNAAHIKWTF
301: ARQETSSVYE LIEVSNGGRL SRHNLHIQQL GPDTVTELSA FHVCQNNQTQ DLHSTLILDH PRGYSRQLHK CIVSHSSGHA VFDGNIRVNR FAQQTDAGQL
401: TRTLLLAPRA TANVKPNLQI IADDVKCSHG AAISDLEEDQ LFYFQARGID LKTAREALVF SFGSEVISRI PFEPIRKSVT SQLKHLLATQ

Best Arabidopsis Sequence Match ( AT1G32500.1 )
(BLAST)

001: MAAATVLGRL SLIPNLSSKP KLKSNRRTTS TSVSVRAQAS FSDPFVLQLA ESLEDSLSAS PSSSLPLQRI RDSSAETLLS TPWPSRKDEP FRFTDTSLIR
101: SSQIEPISTQ QRNSEILDNL TETQFTNAVI IDGFVSNLTI GPSDLPDGVY FGKYSGLPDE LTNRISEFIG NFDSGDLFWS INGMGAPDLM VIYVPEGCKV
201: ENPIYLRYFS GETGDRESKR LPVSNPRVFV LVEEGGEIGI VEEFVGKDEE GFYWTNPVLE VVVQKNAKLK HSYLQKESMA SAHIKWTFVR QEAESEYELV
301: EVSTGGKLGR HNVHVQQLGP DTLTELTTFH MCVNEQTLDL HSKIILDHPR GASRQLHKCI VAHSSGQAVF DGNVRVNRFA QQTNAGQLTR SLLLKPRATV
401: NIKPNLQIIA DDVKCSHGAA ISDLEEDQLF YFQARGIDLE TARRALISSF GSEVIEKFPN REIRDQARNH VKGLL

Arabidopsis Description

ABCI7At1g32500 [Source:UniProtKB/TrEMBL;Acc:Q058Q9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.