Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr8P18250_001 | Banana | cytosol | 71.55 | 71.4 |
TraesCS4A01G271000.1 | Wheat | cytosol | 73.22 | 56.45 |
TraesCS4A01G466700.1 | Wheat | cytosol, nucleus, peroxisome | 38.49 | 56.44 |
TraesCS4B01G043100.1 | Wheat | cytosol | 73.22 | 56.36 |
TraesCS4D01G040400.1 | Wheat | cytosol | 73.22 | 56.18 |
Zm00001d013465_P001 | Maize | cytosol | 73.01 | 55.84 |
HORVU4Hr1G006930.1 | Barley | nucleus | 72.18 | 55.83 |
Os03t0707600-01 | Rice | nucleus | 72.38 | 55.36 |
Zm00001d033680_P001 | Maize | nucleus | 72.38 | 54.92 |
EER93592 | Sorghum | cytosol | 71.97 | 54.86 |
GSMUA_Achr1P21300_001 | Banana | nucleus | 58.37 | 54.07 |
KRH42544 | Soybean | cytosol, nucleus, plastid | 58.37 | 53.97 |
KRH58636 | Soybean | nucleus | 58.79 | 53.73 |
AT1G14920.1 | Thale cress | nucleus | 57.11 | 51.22 |
CDY36236 | Canola | cytosol, nucleus, plastid | 55.65 | 47.84 |
VIT_01s0011g05260.t01 | Wine grape | cytosol | 58.79 | 47.63 |
Bra024875.1-P | Field mustard | nucleus | 55.23 | 46.07 |
AT2G01570.1 | Thale cress | mitochondrion, nucleus | 56.49 | 46.0 |
CDY17662 | Canola | cytosol, nucleus, plastid | 55.02 | 45.98 |
CDY04092 | Canola | cytosol | 49.37 | 44.19 |
CDY64837 | Canola | cytosol | 49.58 | 43.73 |
Bra017443.1-P | Field mustard | cytosol | 49.16 | 42.96 |
GSMUA_Achr6P34550_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 43.93 | 34.37 |
GSMUA_Achr1P16230_001 | Banana | cytosol | 22.38 | 30.06 |
GSMUA_Achr4P23590_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 18.83 | 29.22 |
GSMUA_Achr8P09690_001 | Banana | cytosol | 26.15 | 28.03 |
GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome, plastid | 26.15 | 26.43 |
GSMUA_Achr8P01180_001 | Banana | nucleus | 24.27 | 25.38 |
GSMUA_Achr1P09360_001 | Banana | cytosol | 19.46 | 25.2 |
GSMUA_AchrUn_... | Banana | cytosol | 20.08 | 25.13 |
GSMUA_Achr1P19470_001 | Banana | nucleus | 19.87 | 24.8 |
GSMUA_Achr7P16880_001 | Banana | cytosol | 19.46 | 24.54 |
GSMUA_Achr6P20830_001 | Banana | nucleus | 31.17 | 24.43 |
GSMUA_AchrUn_... | Banana | cytosol | 26.78 | 23.93 |
GSMUA_Achr6P17870_001 | Banana | cytosol | 21.55 | 23.09 |
GSMUA_Achr11P... | Banana | plastid | 26.99 | 22.47 |
GSMUA_Achr10P... | Banana | nucleus | 19.46 | 21.18 |
GSMUA_Achr1P18840_001 | Banana | cytosol | 27.2 | 21.17 |
GSMUA_Achr3P30530_001 | Banana | cytosol | 24.9 | 20.62 |
GSMUA_Achr4P07320_001 | Banana | cytosol | 23.64 | 20.14 |
GSMUA_Achr7P05850_001 | Banana | mitochondrion | 26.78 | 19.69 |
GSMUA_Achr8P09400_001 | Banana | cytosol | 27.41 | 19.49 |
GSMUA_Achr5P21440_001 | Banana | nucleus, plastid | 28.66 | 19.38 |
GSMUA_Achr4P19750_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 27.62 | 15.31 |
GSMUA_Achr11P... | Banana | cytosol | 27.41 | 11.89 |
Protein Annotations
Gene3D:1.10.10.1290 | MapMan:11.6.2.2 | MapMan:15.5.12 | InterPro:DELLA_N_sf | GO:GO:0000989 | GO:GO:0003674 |
GO:GO:0003712 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
EnsemblPlantsGene:GSMUA_Achr10G19650_001 | EnsemblPlants:GSMUA_Achr10P19650_001 | EnsemblPlants:GSMUA_Achr10T19650_001 | InterPro:IPR005202 | InterPro:IPR038088 | UniProt:M0RJP0 |
PFAM:PF03514 | PFAM:PF12041 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF47 | SMART:SM01129 |
InterPro:TF_DELLA | InterPro:TF_DELLA_N | InterPro:TF_GRAS | UniParc:UPI0002962194 | SEG:seg | : |
Description
DELLA protein DWARF8 [Source:GMGC_GENE;Acc:GSMUA_Achr10G19650_001]
Coordinates
chr10:+:25965545..25967622
Molecular Weight (calculated)
51055.5 Da
IEP (calculated)
5.626
GRAVY (calculated)
-0.198
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRGHQDTLH GGGGWYAVEP EMERGKRKTT MRAAEEGGEV DELLAALGYK VRSSDMADVA HKLEQLEMAM VSSAATNDDA LLSHLASDTV HYNPSDLSTW
101: PLPALPAPAD SLVLGSPPSS STTTDAATSA AAALPVVVVD SQEAGIRLVH ALLACAEAVQ QDNLKAADAL VKQISVLATS QGGAMRKVAG YFAEALARRI
201: YRPQPRGGAF AGCRRVHVVD FGMRQGMQWP ALLQALALRP GGPPSFRLTG IGPPQPDNSD ALQEVGWKLA QLAESIRVDF RYRGFVAASL ADLEPYMLLD
301: QDADGGGGGK DEEPEVVAVN SVFELHRLLA RPGALDKVLG TVRAVRPRIV TVVEQEANHN GGTFQERFTE ALHYYSTMFD SLEGGAAAAG AERTERHETL
401: AQWRGRMDRA GFEPVPIGSN AFKQASMLLA LFAGGDGYRV EEKDGCLTLG WHTRPLIATS AWRVAAPAED PLSASAAR
101: PLPALPAPAD SLVLGSPPSS STTTDAATSA AAALPVVVVD SQEAGIRLVH ALLACAEAVQ QDNLKAADAL VKQISVLATS QGGAMRKVAG YFAEALARRI
201: YRPQPRGGAF AGCRRVHVVD FGMRQGMQWP ALLQALALRP GGPPSFRLTG IGPPQPDNSD ALQEVGWKLA QLAESIRVDF RYRGFVAASL ADLEPYMLLD
301: QDADGGGGGK DEEPEVVAVN SVFELHRLLA RPGALDKVLG TVRAVRPRIV TVVEQEANHN GGTFQERFTE ALHYYSTMFD SLEGGAAAAG AERTERHETL
401: AQWRGRMDRA GFEPVPIGSN AFKQASMLLA LFAGGDGYRV EEKDGCLTLG WHTRPLIATS AWRVAAPAED PLSASAAR
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.