Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P20510_001 | Banana | nucleus | 56.2 | 67.74 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 26.76 | 44.72 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 40.88 | 44.33 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 30.66 | 44.21 |
| KRG95361 | Soybean | nucleus | 35.52 | 40.67 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 33.33 | 39.94 |
| PGSC0003DMT400029751 | Potato | nucleus | 35.28 | 38.98 |
| Solyc10g078700.1.1 | Tomato | nucleus | 35.28 | 38.98 |
| KRH67040 | Soybean | nucleus | 34.55 | 38.69 |
| KRH38141 | Soybean | nucleus, plastid | 34.79 | 38.34 |
| KRH71914 | Soybean | nucleus, plastid | 32.36 | 37.15 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 16.55 | 36.36 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 13.38 | 35.95 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 29.2 | 34.88 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 15.82 | 34.76 |
| CDX98259 | Canola | nucleus | 27.01 | 34.15 |
| CDY53504 | Canola | nucleus | 30.66 | 34.05 |
| CDX79888 | Canola | nucleus | 30.41 | 33.97 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 29.44 | 33.89 |
| CDY06881 | Canola | nucleus | 29.93 | 33.88 |
| Bra016891.1-P | Field mustard | nucleus | 29.93 | 33.88 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 28.47 | 33.81 |
| CDY14818 | Canola | nucleus | 30.17 | 33.79 |
| CDY61750 | Canola | nucleus | 25.3 | 33.77 |
| AT2G42200.1 | Thale cress | nucleus | 30.66 | 33.6 |
| Bra003305.1-P | Field mustard | nucleus | 25.79 | 33.54 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 29.68 | 33.06 |
| Bra004674.1-P | Field mustard | nucleus | 29.68 | 33.06 |
| CDX67715 | Canola | nucleus | 25.3 | 32.91 |
| CDY47656 | Canola | nucleus | 25.79 | 32.72 |
| AT3G57920.1 | Thale cress | nucleus | 27.74 | 32.2 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 16.79 | 32.09 |
| Bra014599.1-P | Field mustard | nucleus | 23.36 | 31.79 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 29.68 | 31.44 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 18.0 | 29.02 |
| GSMUA_Achr10P... | Banana | nucleus | 16.06 | 28.95 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 17.03 | 25.55 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 19.71 | 25.39 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 17.76 | 25.09 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 16.55 | 25.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.44 | 24.0 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 20.44 | 23.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.95 | 23.23 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 19.71 | 22.88 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.68 | 22.85 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 18.98 | 22.48 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 21.41 | 22.39 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 18.73 | 22.25 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 19.95 | 22.22 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 18.73 | 22.0 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 21.9 | 21.79 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 19.71 | 21.72 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 16.79 | 21.7 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 19.71 | 21.2 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 16.79 | 21.04 |
| GSMUA_Achr11P... | Banana | nucleus | 21.17 | 20.96 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 22.38 | 20.26 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 21.41 | 20.09 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 21.9 | 19.65 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 20.44 | 19.4 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 19.46 | 19.23 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 21.41 | 18.97 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 21.41 | 18.76 |
| GSMUA_Achr10P... | Banana | nucleus | 21.17 | 17.86 |
| GSMUA_Achr10P... | Banana | nucleus | 21.9 | 17.86 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 22.63 | 17.65 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr6G22280_001 |
| EnsemblPlants:GSMUA_Achr6P22280_001 | EnsemblPlants:GSMUA_Achr6T22280_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0T976 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF67 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI000295051E | SEG:seg | : | : | : | : |
Description
Putative Squamosa promoter-binding-like protein 17 [Source:GMGC_GENE;Acc:GSMUA_Achr6G22280_001]
Coordinates
chr6:+:19179176..19181302
Molecular Weight (calculated)
43817.7 Da
IEP (calculated)
8.280
GRAVY (calculated)
-0.422
Length
411 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCGKTQTPL RLLCFTPTPL PKSHSLLPFL KMPTPSPLPP SLLLVEHMVG LSNDTLHGLM FGEKVYFEDA VGGGGSDSTS KAPPAPSTAP KKGKAVVHGV
101: QQQPPRCQVE GCEADLSGVK AYYCRHKVCG MHSKAPKVVV GGMEQRFCQQ CSRFHQLSEF DQGKRSCRRR LAGHNERRRK PPFSPRYAHL APPSFHEPGR
201: FRSFLMDFAY PNISSSTGAR DICPTVMAGD QVATNHWNDV VDAPSDADAD ADAAAAAAAA PVHGAGSRSH PYSQGSTGQI LYSSPEFPPG ECLGGALDAS
301: CALSLLSTRP RGDHTSRSRR LPTISASGGL NASSSILAHS LVSNNHTANS ASFGHQGSRN SWHEMGMDAA GGSHFSGELE LALQGNGQCL GHGLLGREYD
401: HSGHNIMHWS L
101: QQQPPRCQVE GCEADLSGVK AYYCRHKVCG MHSKAPKVVV GGMEQRFCQQ CSRFHQLSEF DQGKRSCRRR LAGHNERRRK PPFSPRYAHL APPSFHEPGR
201: FRSFLMDFAY PNISSSTGAR DICPTVMAGD QVATNHWNDV VDAPSDADAD ADAAAAAAAA PVHGAGSRSH PYSQGSTGQI LYSSPEFPPG ECLGGALDAS
301: CALSLLSTRP RGDHTSRSRR LPTISASGGL NASSSILAHS LVSNNHTANS ASFGHQGSRN SWHEMGMDAA GGSHFSGELE LALQGNGQCL GHGLLGREYD
401: HSGHNIMHWS L
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.