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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole, nucleus

Predictor Summary:
  • plastid 2
  • nucleus 4
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P27520_001 Banana plastid 25.71 53.59
GSMUA_AchrUn_... Banana nucleus 59.87 51.34
GSMUA_AchrUn_... Banana nucleus 55.49 50.14
GSMUA_AchrUn_... Banana nucleus 50.78 46.29
GSMUA_Achr2P06150_001 Banana nucleus 53.92 43.77
GSMUA_Achr4P16050_001 Banana nucleus 48.59 43.06
GSMUA_Achr11P... Banana nucleus 55.17 42.41
GSMUA_Achr6P06030_001 Banana nucleus 48.9 42.28
GSMUA_Achr9P01380_001 Banana nucleus 48.9 41.82
GSMUA_Achr5P25090_001 Banana nucleus 52.98 40.92
GSMUA_Achr9P29330_001 Banana nucleus 48.28 40.31
HORVU0Hr1G039170.6 Barley nucleus 48.59 38.75
TraesCS7B01G158500.1 Wheat nucleus 48.9 38.14
TraesCS7A01G260500.1 Wheat nucleus 48.28 37.84
Zm00001d006091_P001 Maize nucleus 50.16 37.83
TraesCS7D01G261500.1 Wheat nucleus 48.9 37.68
HORVU5Hr1G076380.9 Barley endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 45.77 37.24
TraesCS5D01G294400.1 Wheat nucleus 48.9 36.11
TraesCS5B01G286000.1 Wheat nucleus 48.9 36.03
EER97011 Sorghum nucleus 52.04 35.78
TraesCS5A01G286700.2 Wheat nucleus 48.59 35.55
Zm00001d021056_P001 Maize nucleus 49.53 33.98
Os08t0531600-01 Rice nucleus 48.28 33.85
Os01t0922600-01 Rice nucleus 32.92 33.76
Zm00001d049822_P001 Maize nucleus 45.45 33.56
Zm00001d049824_P002 Maize nucleus 45.14 33.1
KXG25534 Sorghum nucleus 47.02 32.89
Os09t0507100-00 Rice nucleus 48.28 32.63
GSMUA_Achr1P08440_001 Banana nucleus 18.81 32.09
GSMUA_Achr4P23650_001 Banana nucleus 18.5 31.55
KRG94562 Soybean nucleus 36.05 31.51
KRH06918 Soybean nucleus 36.05 31.51
Zm00001d012015_P001 Maize nucleus 36.36 30.93
VIT_14s0068g01780.t01 Wine grape nucleus 36.36 30.69
EES01979 Sorghum nucleus 37.93 30.02
Zm00001d042319_P001 Maize nucleus 36.99 28.85
GSMUA_Achr2P03070_001 Banana nucleus 18.5 27.44
TraesCS3A01G432500.1 Wheat nucleus 34.8 26.75
TraesCS3B01G468400.1 Wheat nucleus 34.48 26.57
TraesCS3D01G425800.1 Wheat nucleus 34.8 26.49
HORVU3Hr1G094730.2 Barley nucleus 35.11 26.11
GSMUA_Achr3P00810_001 Banana nucleus 20.69 25.88
GSMUA_Achr10P... Banana nucleus 18.5 25.88
GSMUA_Achr5P13440_001 Banana mitochondrion, nucleus 23.51 25.77
TraesCS4D01G332700.1 Wheat nucleus 17.55 25.57
GSMUA_Achr7P20510_001 Banana nucleus 25.39 23.75
GSMUA_Achr4P20590_001 Banana nucleus 20.06 23.53
GSMUA_Achr4P03880_001 Banana nucleus 21.0 23.51
GSMUA_Achr7P05010_001 Banana nucleus 19.44 22.63
GSMUA_Achr4P26940_001 Banana nucleus 24.45 22.48
GSMUA_Achr7P02020_001 Banana nucleus 23.51 21.68
GSMUA_Achr9P22260_001 Banana nucleus 22.57 20.99
GSMUA_Achr4P05720_001 Banana nucleus 22.57 20.81
GSMUA_Achr8P25550_001 Banana nucleus 21.94 20.35
GSMUA_Achr9P27660_001 Banana nucleus 23.2 20.05
GSMUA_Achr4P12470_001 Banana nucleus 21.94 20.0
GSMUA_Achr6P22280_001 Banana nucleus 25.39 19.71
GSMUA_Achr4P24610_001 Banana nucleus 20.06 19.51
GSMUA_Achr9P20220_001 Banana nucleus 15.05 19.51
GSMUA_Achr6P36010_001 Banana nucleus 26.65 19.41
GSMUA_Achr4P01450_001 Banana nucleus 21.63 19.33
GSMUA_Achr2P11940_001 Banana nucleus 18.81 18.87
GSMUA_Achr7P08750_001 Banana nucleus 20.69 18.64
GSMUA_Achr5P21990_001 Banana nucleus 24.76 18.24
GSMUA_Achr3P11170_001 Banana nucleus 21.94 18.04
GSMUA_Achr3P05360_001 Banana nucleus 25.71 17.67
GSMUA_Achr5P22630_001 Banana nucleus 25.08 17.62
GSMUA_Achr9P14160_001 Banana nucleus 25.08 17.47
GSMUA_Achr9P23140_001 Banana nucleus 22.57 17.31
GSMUA_Achr10P... Banana nucleus 26.02 17.04
GSMUA_Achr3P27750_001 Banana nucleus 24.45 16.63
GSMUA_Achr10P... Banana nucleus 26.02 16.47
GSMUA_Achr8P23820_001 Banana nucleus 25.08 15.18
CDX80286 Canola cytosol, nucleus, plasma membrane 0.94 5.17
Protein Annotations
MapMan:15.5.18Gene3D:4.10.1100.10GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0046872EnsemblPlantsGene:GSMUA_Achr7G22940_001
EnsemblPlants:GSMUA_Achr7P22940_001EnsemblPlants:GSMUA_Achr7T22940_001InterPro:IPR004333InterPro:IPR036893UniProt:M0TJY0PFAM:PF03110
PFscan:PS51141PANTHER:PTHR31251PANTHER:PTHR31251:SF33InterPro:SBP_domInterPro:SBP_sfSUPFAM:SSF103612
SignalP:SignalP-noTMUniParc:UPI0002959344SEG:seg:::
Description
Putative Squamosa promoter-binding-like protein 16 [Source:GMGC_GENE;Acc:GSMUA_Achr7G22940_001]
Coordinates
chr7:-:25329623..25333806
Molecular Weight (calculated)
34866.1 Da
IEP (calculated)
8.627
GRAVY (calculated)
-0.422
Length
319 amino acids
Sequence
(BLAST)
001: MRSLAKISPF CLLVLALQIS STTMVSSSSG PSKRQRASSN ASQNASCLVD GCKADLSKCR EYHRRHKVCE AHSKTPVVLV GGQEQRFCQQ CSRFHLLVEF
101: DEVKRSCRKR LDGHNKRRRK PQPSSVNSGT KYLAYPQIFP PTSTESNWAG IVKTEDSTGY TQCTVADLII NRNPFLSDSS HRYSKERKQF PFLQESETSL
201: SSISTLGSLV GQTHFMTSTM SGVGSSSNKM FSNGLSQVLH SDCALSLLSS PTQTSGIKLS HGMPSSDQIP MAEPLVPSLH TVLASDDATD ADIHCQSIFH
301: IGDEGPSNGT SQALPFSWQ
Best Arabidopsis Sequence Match ( AT1G69170.1 )
(BLAST)
001: MDSWSYGRSV FMSNETLLPC DTFAKNRRFE QRLSNNDDVL ISDMAGNSNG FSAVSITKVV PEEEDEENIS SSSKFSSQEL NRIDFKLRSF LDLGNDDDDT
101: SSRGFALPSK KSRASNLCSQ NPLCQVYGCS KDLSSSKDYH KRHRVCEAHS KTSVVIVNGL EQRFCQQCSR FHFLSEFDDG KRSCRRRLAG HNERRRKPAF
201: YFLPGKRHKL LRTSQDVVGN KFLENSSLVL PESFPGSLLY RVIDEDDHRT SRLVSFKDEP TCSMFPTNEQ NSSRTYESKP AIYSTEVSSI WDLHETAASR
301: STRALSLLSA QSQQHLSKFP NTTFSITQPN QNLNHSSSTD YHQMEQPLWI DPGKTNSAGS SSCKGKGTST VDLLQLSSHL QRIEQQRNYT GDVKQEYNEL
401: YFPGS
Arabidopsis Description
SPL6Squamosa promoter-binding-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94JW8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.