Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr6P27520_001 | Banana | plastid | 25.71 | 53.59 |
GSMUA_AchrUn_... | Banana | nucleus | 59.87 | 51.34 |
GSMUA_AchrUn_... | Banana | nucleus | 55.49 | 50.14 |
GSMUA_AchrUn_... | Banana | nucleus | 50.78 | 46.29 |
GSMUA_Achr2P06150_001 | Banana | nucleus | 53.92 | 43.77 |
GSMUA_Achr4P16050_001 | Banana | nucleus | 48.59 | 43.06 |
GSMUA_Achr11P... | Banana | nucleus | 55.17 | 42.41 |
GSMUA_Achr6P06030_001 | Banana | nucleus | 48.9 | 42.28 |
GSMUA_Achr9P01380_001 | Banana | nucleus | 48.9 | 41.82 |
GSMUA_Achr5P25090_001 | Banana | nucleus | 52.98 | 40.92 |
GSMUA_Achr9P29330_001 | Banana | nucleus | 48.28 | 40.31 |
HORVU0Hr1G039170.6 | Barley | nucleus | 48.59 | 38.75 |
TraesCS7B01G158500.1 | Wheat | nucleus | 48.9 | 38.14 |
TraesCS7A01G260500.1 | Wheat | nucleus | 48.28 | 37.84 |
Zm00001d006091_P001 | Maize | nucleus | 50.16 | 37.83 |
TraesCS7D01G261500.1 | Wheat | nucleus | 48.9 | 37.68 |
HORVU5Hr1G076380.9 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 45.77 | 37.24 |
TraesCS5D01G294400.1 | Wheat | nucleus | 48.9 | 36.11 |
TraesCS5B01G286000.1 | Wheat | nucleus | 48.9 | 36.03 |
EER97011 | Sorghum | nucleus | 52.04 | 35.78 |
TraesCS5A01G286700.2 | Wheat | nucleus | 48.59 | 35.55 |
Zm00001d021056_P001 | Maize | nucleus | 49.53 | 33.98 |
Os08t0531600-01 | Rice | nucleus | 48.28 | 33.85 |
Os01t0922600-01 | Rice | nucleus | 32.92 | 33.76 |
Zm00001d049822_P001 | Maize | nucleus | 45.45 | 33.56 |
Zm00001d049824_P002 | Maize | nucleus | 45.14 | 33.1 |
KXG25534 | Sorghum | nucleus | 47.02 | 32.89 |
Os09t0507100-00 | Rice | nucleus | 48.28 | 32.63 |
GSMUA_Achr1P08440_001 | Banana | nucleus | 18.81 | 32.09 |
GSMUA_Achr4P23650_001 | Banana | nucleus | 18.5 | 31.55 |
KRG94562 | Soybean | nucleus | 36.05 | 31.51 |
KRH06918 | Soybean | nucleus | 36.05 | 31.51 |
Zm00001d012015_P001 | Maize | nucleus | 36.36 | 30.93 |
VIT_14s0068g01780.t01 | Wine grape | nucleus | 36.36 | 30.69 |
EES01979 | Sorghum | nucleus | 37.93 | 30.02 |
Zm00001d042319_P001 | Maize | nucleus | 36.99 | 28.85 |
GSMUA_Achr2P03070_001 | Banana | nucleus | 18.5 | 27.44 |
TraesCS3A01G432500.1 | Wheat | nucleus | 34.8 | 26.75 |
TraesCS3B01G468400.1 | Wheat | nucleus | 34.48 | 26.57 |
TraesCS3D01G425800.1 | Wheat | nucleus | 34.8 | 26.49 |
HORVU3Hr1G094730.2 | Barley | nucleus | 35.11 | 26.11 |
GSMUA_Achr3P00810_001 | Banana | nucleus | 20.69 | 25.88 |
GSMUA_Achr10P... | Banana | nucleus | 18.5 | 25.88 |
GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 23.51 | 25.77 |
TraesCS4D01G332700.1 | Wheat | nucleus | 17.55 | 25.57 |
GSMUA_Achr7P20510_001 | Banana | nucleus | 25.39 | 23.75 |
GSMUA_Achr4P20590_001 | Banana | nucleus | 20.06 | 23.53 |
GSMUA_Achr4P03880_001 | Banana | nucleus | 21.0 | 23.51 |
GSMUA_Achr7P05010_001 | Banana | nucleus | 19.44 | 22.63 |
GSMUA_Achr4P26940_001 | Banana | nucleus | 24.45 | 22.48 |
GSMUA_Achr7P02020_001 | Banana | nucleus | 23.51 | 21.68 |
GSMUA_Achr9P22260_001 | Banana | nucleus | 22.57 | 20.99 |
GSMUA_Achr4P05720_001 | Banana | nucleus | 22.57 | 20.81 |
GSMUA_Achr8P25550_001 | Banana | nucleus | 21.94 | 20.35 |
GSMUA_Achr9P27660_001 | Banana | nucleus | 23.2 | 20.05 |
GSMUA_Achr4P12470_001 | Banana | nucleus | 21.94 | 20.0 |
GSMUA_Achr6P22280_001 | Banana | nucleus | 25.39 | 19.71 |
GSMUA_Achr4P24610_001 | Banana | nucleus | 20.06 | 19.51 |
GSMUA_Achr9P20220_001 | Banana | nucleus | 15.05 | 19.51 |
GSMUA_Achr6P36010_001 | Banana | nucleus | 26.65 | 19.41 |
GSMUA_Achr4P01450_001 | Banana | nucleus | 21.63 | 19.33 |
GSMUA_Achr2P11940_001 | Banana | nucleus | 18.81 | 18.87 |
GSMUA_Achr7P08750_001 | Banana | nucleus | 20.69 | 18.64 |
GSMUA_Achr5P21990_001 | Banana | nucleus | 24.76 | 18.24 |
GSMUA_Achr3P11170_001 | Banana | nucleus | 21.94 | 18.04 |
GSMUA_Achr3P05360_001 | Banana | nucleus | 25.71 | 17.67 |
GSMUA_Achr5P22630_001 | Banana | nucleus | 25.08 | 17.62 |
GSMUA_Achr9P14160_001 | Banana | nucleus | 25.08 | 17.47 |
GSMUA_Achr9P23140_001 | Banana | nucleus | 22.57 | 17.31 |
GSMUA_Achr10P... | Banana | nucleus | 26.02 | 17.04 |
GSMUA_Achr3P27750_001 | Banana | nucleus | 24.45 | 16.63 |
GSMUA_Achr10P... | Banana | nucleus | 26.02 | 16.47 |
GSMUA_Achr8P23820_001 | Banana | nucleus | 25.08 | 15.18 |
CDX80286 | Canola | cytosol, nucleus, plasma membrane | 0.94 | 5.17 |
Protein Annotations
MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr7G22940_001 |
EnsemblPlants:GSMUA_Achr7P22940_001 | EnsemblPlants:GSMUA_Achr7T22940_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0TJY0 | PFAM:PF03110 |
PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF33 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
SignalP:SignalP-noTM | UniParc:UPI0002959344 | SEG:seg | : | : | : |
Description
Putative Squamosa promoter-binding-like protein 16 [Source:GMGC_GENE;Acc:GSMUA_Achr7G22940_001]
Coordinates
chr7:-:25329623..25333806
Molecular Weight (calculated)
34866.1 Da
IEP (calculated)
8.627
GRAVY (calculated)
-0.422
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSLAKISPF CLLVLALQIS STTMVSSSSG PSKRQRASSN ASQNASCLVD GCKADLSKCR EYHRRHKVCE AHSKTPVVLV GGQEQRFCQQ CSRFHLLVEF
101: DEVKRSCRKR LDGHNKRRRK PQPSSVNSGT KYLAYPQIFP PTSTESNWAG IVKTEDSTGY TQCTVADLII NRNPFLSDSS HRYSKERKQF PFLQESETSL
201: SSISTLGSLV GQTHFMTSTM SGVGSSSNKM FSNGLSQVLH SDCALSLLSS PTQTSGIKLS HGMPSSDQIP MAEPLVPSLH TVLASDDATD ADIHCQSIFH
301: IGDEGPSNGT SQALPFSWQ
101: DEVKRSCRKR LDGHNKRRRK PQPSSVNSGT KYLAYPQIFP PTSTESNWAG IVKTEDSTGY TQCTVADLII NRNPFLSDSS HRYSKERKQF PFLQESETSL
201: SSISTLGSLV GQTHFMTSTM SGVGSSSNKM FSNGLSQVLH SDCALSLLSS PTQTSGIKLS HGMPSSDQIP MAEPLVPSLH TVLASDDATD ADIHCQSIFH
301: IGDEGPSNGT SQALPFSWQ
001: MDSWSYGRSV FMSNETLLPC DTFAKNRRFE QRLSNNDDVL ISDMAGNSNG FSAVSITKVV PEEEDEENIS SSSKFSSQEL NRIDFKLRSF LDLGNDDDDT
101: SSRGFALPSK KSRASNLCSQ NPLCQVYGCS KDLSSSKDYH KRHRVCEAHS KTSVVIVNGL EQRFCQQCSR FHFLSEFDDG KRSCRRRLAG HNERRRKPAF
201: YFLPGKRHKL LRTSQDVVGN KFLENSSLVL PESFPGSLLY RVIDEDDHRT SRLVSFKDEP TCSMFPTNEQ NSSRTYESKP AIYSTEVSSI WDLHETAASR
301: STRALSLLSA QSQQHLSKFP NTTFSITQPN QNLNHSSSTD YHQMEQPLWI DPGKTNSAGS SSCKGKGTST VDLLQLSSHL QRIEQQRNYT GDVKQEYNEL
401: YFPGS
101: SSRGFALPSK KSRASNLCSQ NPLCQVYGCS KDLSSSKDYH KRHRVCEAHS KTSVVIVNGL EQRFCQQCSR FHFLSEFDDG KRSCRRRLAG HNERRRKPAF
201: YFLPGKRHKL LRTSQDVVGN KFLENSSLVL PESFPGSLLY RVIDEDDHRT SRLVSFKDEP TCSMFPTNEQ NSSRTYESKP AIYSTEVSSI WDLHETAASR
301: STRALSLLSA QSQQHLSKFP NTTFSITQPN QNLNHSSSTD YHQMEQPLWI DPGKTNSAGS SSCKGKGTST VDLLQLSSHL QRIEQQRNYT GDVKQEYNEL
401: YFPGS
Arabidopsis Description
SPL6Squamosa promoter-binding-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94JW8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.