Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 51.39 | 52.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.89 | 52.15 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 43.06 | 48.59 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 19.44 | 45.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.67 | 42.86 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 41.94 | 40.48 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 44.17 | 40.46 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 45.56 | 39.71 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 39.17 | 38.21 |
| GSMUA_Achr11P... | Banana | nucleus | 43.61 | 37.83 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 40.0 | 37.7 |
| Zm00001d006091_P001 | Maize | nucleus | 42.5 | 36.17 |
| TraesCS7A01G260500.1 | Wheat | nucleus | 40.83 | 36.12 |
| HORVU0Hr1G039170.6 | Barley | nucleus | 40.0 | 36.0 |
| TraesCS7B01G158500.1 | Wheat | nucleus | 40.83 | 35.94 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 40.83 | 35.51 |
| EER97011 | Sorghum | nucleus | 43.33 | 33.62 |
| TraesCS5B01G286000.1 | Wheat | nucleus | 40.28 | 33.49 |
| TraesCS5D01G294400.1 | Wheat | nucleus | 40.0 | 33.33 |
| TraesCS5A01G286700.2 | Wheat | nucleus | 40.28 | 33.26 |
| Os08t0531600-01 | Rice | nucleus | 41.67 | 32.97 |
| Zm00001d021056_P001 | Maize | nucleus | 41.67 | 32.26 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 16.67 | 32.09 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 33.61 | 32.01 |
| Zm00001d049824_P002 | Maize | nucleus | 38.61 | 31.95 |
| HORVU5Hr1G076380.9 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 34.72 | 31.89 |
| Zm00001d049822_P001 | Maize | nucleus | 38.06 | 31.71 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 16.39 | 31.55 |
| KXG25534 | Sorghum | nucleus | 39.72 | 31.36 |
| Os01t0922600-01 | Rice | nucleus | 26.67 | 30.87 |
| Os09t0507100-00 | Rice | nucleus | 40.28 | 30.72 |
| Zm00001d012015_P001 | Maize | nucleus | 31.11 | 29.87 |
| EES01979 | Sorghum | nucleus | 32.5 | 29.03 |
| TraesCS3A01G432500.1 | Wheat | nucleus | 33.06 | 28.67 |
| KRH06918 | Soybean | nucleus | 28.89 | 28.49 |
| KRG94562 | Soybean | nucleus | 28.89 | 28.49 |
| TraesCS3D01G425800.1 | Wheat | nucleus | 32.78 | 28.16 |
| TraesCS3B01G468400.1 | Wheat | nucleus | 31.94 | 27.78 |
| Zm00001d042319_P001 | Maize | nucleus | 31.11 | 27.38 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 16.11 | 26.98 |
| HORVU3Hr1G094730.2 | Barley | nucleus | 31.67 | 26.57 |
| GSMUA_Achr10P... | Banana | nucleus | 16.39 | 25.88 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 20.56 | 25.43 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 18.89 | 24.82 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 17.5 | 24.71 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 18.61 | 24.63 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 22.5 | 23.75 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 18.61 | 23.51 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 21.94 | 23.03 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 21.11 | 21.97 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 21.11 | 21.71 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 22.22 | 21.68 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 20.56 | 21.51 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 20.28 | 21.1 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 20.28 | 21.04 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 18.33 | 20.75 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 23.33 | 20.44 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 18.61 | 20.43 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 23.61 | 19.41 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 19.17 | 19.33 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 18.33 | 18.64 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 23.61 | 18.56 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 22.22 | 18.48 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 19.72 | 18.3 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 22.78 | 18.06 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 20.83 | 18.03 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 23.06 | 17.89 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 12.22 | 17.89 |
| GSMUA_Achr10P... | Banana | nucleus | 23.33 | 17.25 |
| TraesCS4D01G332700.1 | Wheat | nucleus | 10.28 | 16.89 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 21.67 | 16.63 |
| GSMUA_Achr10P... | Banana | nucleus | 22.78 | 16.27 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 21.39 | 14.61 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.39 | 8.62 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr4G16050_001 |
| EnsemblPlants:GSMUA_Achr4P16050_001 | EnsemblPlants:GSMUA_Achr4T16050_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0SPB9 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF14 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI000295A616 | SEG:seg | : | : | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G16050_001]
Coordinates
chr4:+:14222664..14226415
Molecular Weight (calculated)
39257.8 Da
IEP (calculated)
7.993
GRAVY (calculated)
-0.581
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWHLKIPPW NPEELGRDAE LSVGSAAGGS NSGCFGLPDK SNDQAAASTT TAAASPSGPT KRARARSRSP ANGASCSVDG CTADLSKCRE YHRRHKVCEA
101: HSKTPVVVVR GQEQRFCQQC SRFHLLQEFD EVKRSCRRRL DGHNKRRRKS QPDSTNSGRL FSDRQGGVST YPLVYPTTAA ESNWAGDVTR TEKRTPPQLI
201: SHHNFSISYS FGGERKQLHI IQDGETGNKA TQSQLNLCAV TPYDGRSSGS RMFDCALSLL SSATSDVNLS HMVPLSDTIS MVQYGGFMQH TLSQAESDVG
301: TPTGCSMGKN AEINCHSKFQ VEGEDCLDGN SQSLPSYWPY TNPYGFLLII LDVLALVTVG
101: HSKTPVVVVR GQEQRFCQQC SRFHLLQEFD EVKRSCRRRL DGHNKRRRKS QPDSTNSGRL FSDRQGGVST YPLVYPTTAA ESNWAGDVTR TEKRTPPQLI
201: SHHNFSISYS FGGERKQLHI IQDGETGNKA TQSQLNLCAV TPYDGRSSGS RMFDCALSLL SSATSDVNLS HMVPLSDTIS MVQYGGFMQH TLSQAESDVG
301: TPTGCSMGKN AEINCHSKFQ VEGEDCLDGN SQSLPSYWPY TNPYGFLLII LDVLALVTVG
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.