Factsheet for GSMUA_Achr2P03070_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 5
nucleus 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P08440_001	Banana	nucleus	62.33	71.66
KRG88838	Soybean	nucleus	46.05	52.11
KRH55227	Soybean	nucleus	44.65	51.89
GSMUA_Achr4P23650_001	Banana	nucleus	44.19	50.8
TraesCS2B01G250900.1	Wheat	nucleus	45.12	50.52
TraesCS2A01G232400.1	Wheat	nucleus	44.65	50.0
TraesCS2D01G232800.1	Wheat	nucleus	44.19	49.48
VIT_19s0014g02350.t01	Wine grape	nucleus	46.05	48.53
KRH22053	Soybean	nucleus	40.93	47.06
KRH27270	Soybean	nucleus	40.93	47.06
Solyc07g053810.2.1	Tomato	nucleus	32.09	46.94
HORVU2Hr1G048280.2	Barley	plastid	40.0	44.1
PGSC0003DMT400082789	Potato	nucleus	33.49	43.64
Os07t0505200-01	Rice	nucleus	41.4	41.2
EER97257	Sorghum	nucleus	40.93	40.93
Zm00001d006451_P001	Maize	mitochondrion	41.86	35.43
GSMUA_Achr6P27520_001	Banana	plastid	25.12	35.29
Zm00001d021573_P001	Maize	mitochondrion	28.37	29.61
GSMUA_Achr10P...	Banana	nucleus	31.16	29.39
KXG36284	Sorghum	nucleus	28.84	28.44
GSMUA_Achr3P00810_001	Banana	nucleus	28.84	24.31
GSMUA_Achr4P20590_001	Banana	nucleus	30.7	24.26
GSMUA_Achr7P05010_001	Banana	nucleus	30.23	23.72
GSMUA_Achr4P03880_001	Banana	nucleus	29.3	22.11
GSMUA_Achr5P13440_001	Banana	mitochondrion, nucleus	29.3	21.65
GSMUA_Achr7P20510_001	Banana	nucleus	31.16	19.65
GSMUA_Achr4P26940_001	Banana	nucleus	31.63	19.6
GSMUA_Achr4P24610_001	Banana	nucleus	29.77	19.51
GSMUA_Achr7P02020_001	Banana	nucleus	30.23	18.79
GSMUA_Achr9P22260_001	Banana	nucleus	29.77	18.66
GSMUA_Achr8P25550_001	Banana	nucleus	29.77	18.6
GSMUA_Achr2P11940_001	Banana	nucleus	27.44	18.55
GSMUA_Achr7P22940_001	Banana	nucleus, vacuole	27.44	18.5
GSMUA_Achr4P01450_001	Banana	nucleus	29.77	17.93
GSMUA_Achr7P08750_001	Banana	nucleus	29.3	17.8
GSMUA_AchrUn_...	Banana	nucleus	28.37	17.43
GSMUA_Achr9P27660_001	Banana	nucleus	29.3	17.07
GSMUA_Achr4P12470_001	Banana	nucleus	27.44	16.86
GSMUA_Achr6P06030_001	Banana	nucleus	28.84	16.8
GSMUA_Achr6P22280_001	Banana	nucleus	32.09	16.79
GSMUA_AchrUn_...	Banana	nucleus	27.44	16.71
GSMUA_Achr4P05720_001	Banana	nucleus	26.51	16.47
GSMUA_Achr4P16050_001	Banana	nucleus	26.98	16.11
GSMUA_Achr9P01380_001	Banana	nucleus	27.91	16.09
GSMUA_AchrUn_...	Banana	nucleus	27.44	15.86
GSMUA_Achr9P29330_001	Banana	nucleus	27.91	15.71
GSMUA_Achr5P25090_001	Banana	nucleus	29.3	15.25
GSMUA_Achr2P06150_001	Banana	nucleus	27.44	15.01
GSMUA_Achr3P11170_001	Banana	nucleus	26.98	14.95
GSMUA_Achr9P23140_001	Banana	nucleus	26.98	13.94
GSMUA_Achr6P36010_001	Banana	nucleus	27.91	13.7
GSMUA_Achr5P22630_001	Banana	nucleus	28.84	13.66
GSMUA_Achr5P21990_001	Banana	nucleus	27.44	13.63
GSMUA_Achr11P...	Banana	nucleus	26.05	13.49
GSMUA_Achr9P20220_001	Banana	nucleus	15.35	13.41
GSMUA_Achr3P05360_001	Banana	nucleus	28.84	13.36
GSMUA_Achr9P14160_001	Banana	nucleus	28.37	13.32
GSMUA_Achr3P27750_001	Banana	nucleus	27.44	12.58
GSMUA_Achr10P...	Banana	nucleus	27.91	12.32
GSMUA_Achr10P...	Banana	nucleus	28.84	12.3
GSMUA_Achr8P23820_001	Banana	nucleus	27.44	11.2

Protein Annotations

MapMan:15.5.18	Gene3D:4.10.1100.10	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr2G03070_001	EnsemblPlants:GSMUA_Achr2P03070_001
EnsemblPlants:GSMUA_Achr2T03070_001	InterPro:IPR004333	InterPro:IPR036893	UniProt:M0S4P8	PFAM:PF03110	PIRSF:PIRSF037575
PFscan:PS51141	PANTHER:PTHR31251	InterPro:SBP_dom	InterPro:SBP_fam	InterPro:SBP_sf	SUPFAM:SSF103612
UniParc:UPI000296F9DA	SEG:seg	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G03070_001]

Coordinates

chr2:+:8779484..8780919

Molecular Weight (calculated)

23747.7 Da

IEP (calculated)

9.188

GRAVY (calculated)

-0.877

Length

215 amino acids

Sequence
(BLAST)

001: MDPILPPLPS LTFVPLSSRA FSPNNSTNSS SSSSLPLMEY RRTPIDPASR NSQREKAMKE AALSPTQVAT LGEDEEVMEE DKKRRVSFSS SAAARTGPDA
101: GGGGGGASQP CCQVDDCAAD LREAKRYHRR HKVCEAHSKA AVVVVAGLRQ RFCQQCSRFH ELAEFDDSKR SCRRRLAGHN ERRRKSSTDT QPEGSNRCRE
201: ADLPGNPAYK HFQIR

Best Arabidopsis Sequence Match ( AT1G53160.3 )
(BLAST)

001: MEGKRSQGQG YMKKKSYLVE EDMETDTDEE EEVGRDRVRG SRGSINRGGS LRLCQVDRCT ADMKEAKLYH RRHKVCEVHA KASSVFLSGL NQRFCQQCSR
101: FHDLQEFDEA KRSCRRRLAG HNERRRKSSG ESTYGEGSGR RGINGQVVMQ NQERSRIRVR SVTYPKAQGN Y

Arabidopsis Description

SPL4Squamosa promoter-binding-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7A9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.