Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P05010_001 | Banana | nucleus | 65.81 | 65.33 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 49.26 | 52.55 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 63.6 | 48.87 |
| GSMUA_Achr10P... | Banana | nucleus | 37.5 | 44.74 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 19.85 | 35.29 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 23.9 | 34.76 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 23.16 | 33.69 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 36.4 | 31.23 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 24.26 | 30.7 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 34.93 | 28.96 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 32.72 | 27.99 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 36.76 | 25.77 |
| TraesCS7B01G402300.1 | Wheat | nucleus | 36.4 | 25.38 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 38.6 | 25.24 |
| TraesCS7A01G495100.1 | Wheat | nucleus | 38.6 | 25.06 |
| TraesCS7B01G402400.1 | Wheat | nucleus | 36.76 | 24.94 |
| TraesCS7B01G402200.1 | Wheat | nucleus | 37.87 | 24.7 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 36.76 | 24.63 |
| TraesCS7A01G494900.1 | Wheat | nucleus | 35.66 | 24.62 |
| TraesCS7A01G494800.1 | Wheat | nucleus | 34.56 | 23.56 |
| Zm00001d046906_P001 | Maize | nucleus | 36.4 | 23.35 |
| Zm00001d036692_P001 | Maize | nucleus | 36.4 | 22.81 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 34.19 | 22.79 |
| Os06t0659100-00 | Rice | nucleus | 35.66 | 22.77 |
| EER88765 | Sorghum | nucleus | 37.13 | 22.75 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 22.79 | 21.75 |
| TraesCS6B01G180300.1 | Wheat | nucleus | 35.29 | 21.72 |
| Zm00001d053756_P001 | Maize | nucleus | 32.35 | 21.67 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 35.66 | 21.65 |
| HORVU7Hr1G110980.3 | Barley | nucleus, plastid | 35.66 | 21.6 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 35.66 | 21.46 |
| Os02t0177300-00 | Rice | nucleus | 36.76 | 21.37 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.21 | 21.14 |
| Zm00001d002005_P001 | Maize | nucleus | 30.88 | 21.05 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 31.25 | 20.88 |
| Zm00001d015451_P001 | Maize | nucleus | 33.82 | 20.86 |
| TraesCS2B01G530400.1 | Wheat | nucleus | 31.25 | 20.83 |
| Zm00001d026491_P001 | Maize | nucleus | 30.15 | 20.71 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 31.25 | 20.63 |
| EES11579 | Sorghum | nucleus | 30.15 | 20.5 |
| OQU84482 | Sorghum | nucleus | 33.46 | 20.45 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 25.74 | 20.35 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 21.69 | 20.27 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 23.53 | 20.06 |
| Os04t0656500-01 | Rice | nucleus | 30.51 | 19.95 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 25.0 | 19.65 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 26.47 | 19.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.0 | 19.26 |
| HORVU6Hr1G030490.2 | Barley | nucleus, plastid | 34.19 | 18.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.74 | 18.82 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 23.53 | 18.77 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 25.37 | 18.7 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 24.63 | 18.61 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 23.16 | 18.16 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 25.37 | 18.06 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 23.16 | 18.0 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 24.63 | 17.96 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 23.53 | 17.93 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 22.43 | 17.63 |
| GSMUA_Achr11P... | Banana | nucleus | 26.84 | 17.59 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 26.47 | 17.43 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 21.69 | 17.2 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 24.63 | 17.05 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 24.26 | 17.01 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 26.84 | 16.86 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 25.37 | 16.59 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 25.0 | 16.55 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 26.47 | 16.44 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 27.21 | 16.3 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 27.94 | 16.2 |
| GSMUA_Achr10P... | Banana | nucleus | 29.04 | 15.67 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 26.1 | 15.5 |
| GSMUA_Achr10P... | Banana | nucleus | 27.21 | 15.2 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 25.74 | 15.09 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 26.47 | 13.66 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 9.56 | 10.57 |
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr4G20590_001 |
| EnsemblPlants:GSMUA_Achr4P20590_001 | EnsemblPlants:GSMUA_Achr4T20590_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0SQM2 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF4 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI0002956852 | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G20590_001]
Coordinates
chr4:+:21178985..21180935
Molecular Weight (calculated)
30501.8 Da
IEP (calculated)
8.911
GRAVY (calculated)
-0.725
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNKSSSAEA FLPSMMSFSG LEGSSQKQHH IWDWETSSHN PNTTIPSTTY ELQDHAVFPC VPLPDCPPPL LPMSNFHFYS PPPMPDYPVV LIKREDGTGG
101: CGRIGLNLGH RTYFSSGDAL AIDWQLSRST LNNHQPRCQA EGCKADLSGA KHYHRRHRVC EFHSKATVVI VGGLQQRFCQ QCSRFHVLAE FDEAKRSCRK
201: RLADHNRRRR KPQLPTTTTT ESSPSENTTT NSSEKATTDT RKFRSSCSCN SLSHLGRLSS SHAFTTILKQ QP
101: CGRIGLNLGH RTYFSSGDAL AIDWQLSRST LNNHQPRCQA EGCKADLSGA KHYHRRHRVC EFHSKATVVI VGGLQQRFCQ QCSRFHVLAE FDEAKRSCRK
201: RLADHNRRRR KPQLPTTTTT ESSPSENTTT NSSEKATTDT RKFRSSCSCN SLSHLGRLSS SHAFTTILKQ QP
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.