Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G482200.1 | Wheat | nucleus | 80.95 | 79.17 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 75.69 | 74.38 |
| TraesCS7A01G494900.1 | Wheat | nucleus | 72.68 | 73.6 |
| TraesCS7A01G495100.1 | Wheat | nucleus | 74.94 | 71.36 |
| HORVU7Hr1G110980.3 | Barley | nucleus, plastid | 72.68 | 64.59 |
| EER88765 | Sorghum | nucleus | 60.15 | 54.05 |
| Os06t0659100-00 | Rice | nucleus | 57.64 | 53.99 |
| Zm00001d046906_P001 | Maize | nucleus | 56.39 | 53.07 |
| Zm00001d036692_P001 | Maize | nucleus | 56.14 | 51.61 |
| Bra032662.1-P | Field mustard | nucleus | 16.04 | 40.51 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 43.11 | 38.39 |
| TraesCS2A01G232400.1 | Wheat | nucleus | 16.79 | 34.9 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 23.56 | 34.56 |
| GSMUA_Achr10P... | Banana | nucleus | 19.3 | 33.77 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 21.55 | 33.73 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 22.81 | 33.21 |
| KRH75288 | Soybean | nucleus | 21.55 | 29.97 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 22.06 | 28.95 |
| PGSC0003DMT400066955 | Potato | nucleus | 21.55 | 28.48 |
| PGSC0003DMT400074976 | Potato | nucleus | 20.8 | 28.33 |
| Solyc10g018780.1.1 | Tomato | nucleus | 20.55 | 27.99 |
| Solyc01g090730.2.1 | Tomato | nucleus | 20.8 | 27.76 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 24.56 | 27.68 |
| KRH48747 | Soybean | nucleus | 23.31 | 27.51 |
| KRH66611 | Soybean | nucleus | 23.06 | 27.38 |
| CDX90071 | Canola | nucleus | 21.3 | 27.24 |
| Bra033221.1-P | Field mustard | nucleus | 22.06 | 26.83 |
| AT1G02065.1 | Thale cress | nucleus | 21.55 | 25.83 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 26.57 | 25.73 |
| CDY38043 | Canola | nucleus | 21.55 | 25.67 |
| CDY15132 | Canola | nucleus | 14.54 | 24.89 |
| KRH07602 | Soybean | nucleus | 13.03 | 24.07 |
| TraesCS2A01G413900.1 | Wheat | nucleus | 19.05 | 21.78 |
| TraesCS5A01G265900.2 | Wheat | nucleus | 22.31 | 21.65 |
| TraesCS7A01G260500.1 | Wheat | nucleus | 21.8 | 21.38 |
| TraesCS6A01G155300.1 | Wheat | nucleus | 17.04 | 20.73 |
| TraesCS7A01G246500.1 | Wheat | nucleus | 19.8 | 20.47 |
| TraesCS3A01G432500.1 | Wheat | nucleus | 20.55 | 19.76 |
| TraesCS5A01G286700.2 | Wheat | nucleus | 21.3 | 19.5 |
| TraesCS6A01G110100.2 | Wheat | nucleus | 19.3 | 16.21 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G494800.1 | EnsemblPlantsGene:TraesCS7A01G494800 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR004333 |
| InterPro:IPR036893 | InterPro:SBP_dom | InterPro:SBP_sf | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF34 | PFAM:PF03110 |
| PFscan:PS51141 | SEG:seg | SUPFAM:SSF103612 | MapMan:15.5.18 | : | : |
Description
No Description!
Coordinates
chr7A:+:684292470..684297380
Molecular Weight (calculated)
43114.5 Da
IEP (calculated)
9.055
GRAVY (calculated)
-0.474
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSSGRMNAA AGDDLPLAAM QPPPYVGFEL AASMMAGGGG GGQPHEGAMI LDNFHFPAAA AAFNQFQEAP HHQMLALPSN GNGGCGLVHM APPPMSGMQL
101: QMPPMAMHGH GDVCPALGMV KREGGAGDAG RIDLNHGQRT CFPTGDMMAV DPMLMRSRLG SVFDLGFGRV HRQPPRCQVE YCKADLSGAK HYHRRHKVCE
201: YHAKAALVSA AGKQQRFCQQ CSRFHVITEF DQTKRSCRKR LAEHNRRRRK PVASGAGAVS KDLAVPSRKQ NAGGISSSYA GDNNTLSATY TSATSCLQQG
301: QARLAAARQM TLALGVPPEK DRRQQQLSNS MQLHHHQEQQ HFITSLLHNS NIMSRSSVCS STMPSAAVAN SQVFDQQNDN TNGSNHANNG IHMFEVEFM
101: QMPPMAMHGH GDVCPALGMV KREGGAGDAG RIDLNHGQRT CFPTGDMMAV DPMLMRSRLG SVFDLGFGRV HRQPPRCQVE YCKADLSGAK HYHRRHKVCE
201: YHAKAALVSA AGKQQRFCQQ CSRFHVITEF DQTKRSCRKR LAEHNRRRRK PVASGAGAVS KDLAVPSRKQ NAGGISSSYA GDNNTLSATY TSATSCLQQG
301: QARLAAARQM TLALGVPPEK DRRQQQLSNS MQLHHHQEQQ HFITSLLHNS NIMSRSSVCS STMPSAAVAN SQVFDQQNDN TNGSNHANNG IHMFEVEFM
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.