Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15132 | Canola | nucleus | 67.95 | 90.99 |
| Bra032662.1-P | Field mustard | nucleus | 38.78 | 76.58 |
| CDY38043 | Canola | nucleus | 75.64 | 70.45 |
| AT1G02065.1 | Thale cress | nucleus | 74.36 | 69.67 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 49.04 | 50.33 |
| PGSC0003DMT400074976 | Potato | nucleus | 45.83 | 48.81 |
| Solyc10g018780.1.1 | Tomato | nucleus | 45.19 | 48.12 |
| Solyc01g090730.2.1 | Tomato | nucleus | 45.83 | 47.83 |
| KRH66611 | Soybean | nucleus | 50.64 | 47.02 |
| PGSC0003DMT400066955 | Potato | nucleus | 44.23 | 45.7 |
| KRH48747 | Soybean | nucleus | 49.04 | 45.27 |
| KRH75288 | Soybean | nucleus | 39.1 | 42.51 |
| CDY17204 | Canola | nucleus | 17.95 | 39.44 |
| CDY57212 | Canola | nucleus | 17.63 | 39.01 |
| CDY27935 | Canola | nucleus | 18.27 | 38.78 |
| CDY37684 | Canola | nucleus | 16.99 | 37.59 |
| KRH07602 | Soybean | nucleus | 25.96 | 37.5 |
| CDY24113 | Canola | nucleus | 18.27 | 35.4 |
| CDY50515 | Canola | nucleus | 17.63 | 35.03 |
| CDY20128 | Canola | nucleus | 18.27 | 32.39 |
| CDY61210 | Canola | nucleus | 18.27 | 31.84 |
| CDX97645 | Canola | nucleus | 18.27 | 31.84 |
| CDY25876 | Canola | nucleus | 17.95 | 31.82 |
| CDX98540 | Canola | nucleus | 17.95 | 31.28 |
| CDY32310 | Canola | nucleus | 17.63 | 31.25 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 32.69 | 31.1 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 31.09 | 30.5 |
| CDX79544 | Canola | nucleus | 18.27 | 30.48 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 28.21 | 27.76 |
| CDX95958 | Canola | nucleus | 22.76 | 23.75 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 29.49 | 23.71 |
| EES11579 | Sorghum | nucleus | 29.81 | 23.25 |
| Zm00001d026491_P001 | Maize | nucleus | 29.49 | 23.23 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 30.13 | 23.1 |
| TraesCS6B01G180300.1 | Wheat | nucleus | 32.69 | 23.08 |
| Zm00001d002005_P001 | Maize | nucleus | 29.49 | 23.06 |
| TraesCS2B01G530400.1 | Wheat | nucleus | 30.13 | 23.04 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 33.33 | 23.01 |
| TraesCS7B01G402300.1 | Wheat | nucleus | 28.53 | 22.82 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 30.13 | 22.82 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 32.69 | 22.77 |
| TraesCS7B01G402400.1 | Wheat | nucleus | 29.17 | 22.69 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 29.49 | 22.66 |
| Zm00001d053756_P001 | Maize | nucleus | 29.49 | 22.66 |
| Os04t0656500-01 | Rice | nucleus | 30.13 | 22.6 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 29.81 | 22.36 |
| Zm00001d015451_P001 | Maize | nucleus | 31.41 | 22.22 |
| TraesCS7A01G494900.1 | Wheat | nucleus | 27.88 | 22.08 |
| TraesCS7B01G402200.1 | Wheat | nucleus | 29.49 | 22.06 |
| TraesCS7A01G495100.1 | Wheat | nucleus | 29.49 | 21.96 |
| Zm00001d046906_P001 | Maize | nucleus | 29.49 | 21.7 |
| EER88765 | Sorghum | nucleus | 30.77 | 21.62 |
| Zm00001d036692_P001 | Maize | nucleus | 29.81 | 21.43 |
| CDY69014 | Canola | nucleus | 21.79 | 21.32 |
| TraesCS7A01G494800.1 | Wheat | nucleus | 27.24 | 21.3 |
| OQU84482 | Sorghum | nucleus | 30.13 | 21.12 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 27.56 | 21.08 |
| HORVU6Hr1G030490.2 | Barley | nucleus, plastid | 33.01 | 20.98 |
| CDY27612 | Canola | nucleus | 22.12 | 20.97 |
| Os06t0659100-00 | Rice | nucleus | 28.53 | 20.89 |
| CDY61750 | Canola | nucleus | 20.51 | 20.78 |
| CDY50300 | Canola | nucleus | 21.79 | 20.73 |
| Os02t0177300-00 | Rice | nucleus | 31.09 | 20.73 |
| CDX96251 | Canola | nucleus | 21.47 | 20.43 |
| CDX81606 | Canola | nucleus | 21.79 | 20.42 |
| CDX84928 | Canola | nucleus | 23.72 | 20.33 |
| CDY67700 | Canola | nucleus | 22.44 | 20.23 |
| CDY27611 | Canola | nucleus | 23.4 | 20.0 |
| CDX98259 | Canola | nucleus | 20.51 | 19.69 |
| CDY11816 | Canola | nucleus | 22.76 | 19.45 |
| CDY47656 | Canola | nucleus | 20.19 | 19.44 |
| CDX71667 | Canola | nucleus | 22.12 | 19.22 |
| HORVU7Hr1G110980.3 | Barley | nucleus, plastid | 27.56 | 19.15 |
| CDX84927 | Canola | nucleus | 22.44 | 19.07 |
| CDX84872 | Canola | nucleus | 20.83 | 19.06 |
| CDX67715 | Canola | nucleus | 19.23 | 18.99 |
| CDY45826 | Canola | nucleus | 20.51 | 18.77 |
| CDY32959 | Canola | nucleus | 23.4 | 18.72 |
| CDY43604 | Canola | nucleus | 23.08 | 18.7 |
| CDY34028 | Canola | nucleus | 20.83 | 18.68 |
| CDY03913 | Canola | nucleus | 21.79 | 18.33 |
| CDY15713 | Canola | nucleus | 22.76 | 18.21 |
| CDY15712 | Canola | nucleus | 21.79 | 18.18 |
| CDY03914 | Canola | nucleus | 21.47 | 18.01 |
| CDX79888 | Canola | nucleus | 20.83 | 17.66 |
| CDY06881 | Canola | nucleus | 20.51 | 17.63 |
| CDY53504 | Canola | nucleus | 20.83 | 17.57 |
| CDY14818 | Canola | nucleus | 19.87 | 16.89 |
| CDY47812 | Canola | nucleus | 23.72 | 14.34 |
| CDY22356 | Canola | nucleus | 23.4 | 14.07 |
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 1.92 | 9.38 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 0.96 | 5.17 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:A0A078DLE0 | EnsemblPlants:CDX90071 | ProteinID:CDX90071 | ProteinID:CDX90071.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00150582001 | InterPro:IPR004333 | InterPro:IPR036893 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF4 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI0004EDE361 | SEG:seg | : | : | : | : |
Description
BnaA10g00110D
Coordinates
chrLK031861:-:1547579..1549185
Molecular Weight (calculated)
34816.9 Da
IEP (calculated)
8.349
GRAVY (calculated)
-0.807
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDYEWDNPS VIILSGEDRS HHHQQEPDPT RVLSIFDPTQ THHSQSSYSN TCPPLFPSLS NQQHLTVYGH QTSNQFHPSF VYDPRITNHP YSPSSDSIYG
101: HPHHSALFSF DQTGSGGSGS SYNFLIPKTE VDVSRPLDFT SNRIGLNLGG RTYFSAADDD FVSRLTPRCQ AEGCNADLSH AKHYHRRHKV CEFHSKASTV
201: VAAGLSQRFC QQCSRFHLLS EFDNGKRSCR KRLADHNRRR RKCHQSISKP TPDTTTTPQS PNDSGVKSSS SPSNALPTIS LECFRQKQFQ TTTTPSSSTS
301: ASSSNSMFFS SG
101: HPHHSALFSF DQTGSGGSGS SYNFLIPKTE VDVSRPLDFT SNRIGLNLGG RTYFSAADDD FVSRLTPRCQ AEGCNADLSH AKHYHRRHKV CEFHSKASTV
201: VAAGLSQRFC QQCSRFHLLS EFDNGKRSCR KRLADHNRRR RKCHQSISKP TPDTTTTPQS PNDSGVKSSS SPSNALPTIS LECFRQKQFQ TTTTPSSSTS
301: ASSSNSMFFS SG
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.