Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 15.69 | 100.0 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 98.77 | 99.02 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 96.57 | 95.63 |
| Os04t0656500-01 | Rice | nucleus | 76.23 | 74.76 |
| EES11579 | Sorghum | nucleus | 73.28 | 74.75 |
| Zm00001d026491_P001 | Maize | nucleus | 70.59 | 72.73 |
| Bra032662.1-P | Field mustard | nucleus | 17.4 | 44.94 |
| GSMUA_Achr10P... | Banana | nucleus | 21.08 | 37.72 |
| TraesCS2B01G250900.1 | Wheat | nucleus | 16.42 | 34.9 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 21.32 | 34.12 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 21.57 | 32.12 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 20.83 | 31.25 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 22.79 | 30.59 |
| CDX90071 | Canola | nucleus | 23.04 | 30.13 |
| KRH75288 | Soybean | nucleus | 21.08 | 29.97 |
| Bra033221.1-P | Field mustard | nucleus | 23.53 | 29.27 |
| Solyc01g090730.2.1 | Tomato | nucleus | 21.08 | 28.76 |
| PGSC0003DMT400074976 | Potato | nucleus | 20.59 | 28.67 |
| Solyc10g018780.1.1 | Tomato | nucleus | 20.59 | 28.67 |
| CDY38043 | Canola | nucleus | 23.53 | 28.66 |
| AT1G02065.1 | Thale cress | nucleus | 23.28 | 28.53 |
| KRH66611 | Soybean | nucleus | 23.28 | 28.27 |
| PGSC0003DMT400066955 | Potato | nucleus | 20.83 | 28.15 |
| KRH48747 | Soybean | nucleus | 23.28 | 28.11 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 24.26 | 27.97 |
| TraesCS7B01G402300.1 | Wheat | nucleus | 26.72 | 27.95 |
| CDY15132 | Canola | nucleus | 15.93 | 27.9 |
| TraesCS7B01G402400.1 | Wheat | nucleus | 26.23 | 26.68 |
| TraesCS7B01G402200.1 | Wheat | nucleus | 26.72 | 26.14 |
| KRH07602 | Soybean | nucleus | 13.24 | 25.0 |
| TraesCS6B01G183400.1 | Wheat | nucleus | 19.12 | 23.85 |
| TraesCS7B01G144900.1 | Wheat | nucleus | 22.3 | 23.58 |
| TraesCS6B01G180300.1 | Wheat | nucleus | 25.25 | 23.3 |
| TraesCS2B01G432700.1 | Wheat | nucleus | 19.61 | 22.66 |
| TraesCS5B01G265600.2 | Wheat | nucleus | 21.32 | 21.97 |
| TraesCS7B01G158500.1 | Wheat | nucleus | 21.32 | 21.27 |
| TraesCS5B01G286000.1 | Wheat | nucleus | 22.06 | 20.79 |
| TraesCS3B01G468400.1 | Wheat | nucleus | 20.34 | 20.05 |
| TraesCS6B01G138400.1 | Wheat | nucleus | 22.06 | 19.03 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G530400.1 | EnsemblPlantsGene:TraesCS2B01G530400 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR004333 |
| InterPro:IPR036893 | InterPro:SBP_dom | InterPro:SBP_sf | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF17 | PFAM:PF03110 |
| PFscan:PS51141 | SEG:seg | SUPFAM:SSF103612 | MapMan:15.5.18 | : | : |
Description
No Description!
Coordinates
chr2B:-:725576125..725580285
Molecular Weight (calculated)
43962.9 Da
IEP (calculated)
7.664
GRAVY (calculated)
-0.758
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNLPAAAGN SCDEFGYGAP DPPPPSLFPI MDHQEGGGGI HREHDHHHHH HLGGYSLEPS SLALLPPSSH ATIAAHSPHD ILQFYHHPTS HHYLAAAAAG
101: GNGSPYGQFG GGGSAGGFQS YYHQQVGTGA PEYYFPTLVS SAEENMASFA ATQLGLNLGY RTYFPPRGGY TYGHHPPRCQ AEGCKADLSG AKRYHRRHKV
201: CEHHSKAPVV VTAGGLHQRF CQQCSRFHLL DEFDDAKKSC RKRLADHNRR RRKSKPSEAD AADKRRTQAS KAASTKGKAA GSSSKSTGTG DGMDIQVQLG
301: SGDLSKNQDE TMGLGEVVKE MQVDPKGKAS MQQQQGHHGH GLHLQSQHGF PFPSSSAGSC FPQSQAVSST DNTSNIGQVQ QEQPGLGFHQ HSNILQLGQA
401: MFDLDFDH
101: GNGSPYGQFG GGGSAGGFQS YYHQQVGTGA PEYYFPTLVS SAEENMASFA ATQLGLNLGY RTYFPPRGGY TYGHHPPRCQ AEGCKADLSG AKRYHRRHKV
201: CEHHSKAPVV VTAGGLHQRF CQQCSRFHLL DEFDDAKKSC RKRLADHNRR RRKSKPSEAD AADKRRTQAS KAASTKGKAA GSSSKSTGTG DGMDIQVQLG
301: SGDLSKNQDE TMGLGEVVKE MQVDPKGKAS MQQQQGHHGH GLHLQSQHGF PFPSSSAGSC FPQSQAVSST DNTSNIGQVQ QEQPGLGFHQ HSNILQLGQA
401: MFDLDFDH
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.