Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P20590_001 | Banana | nucleus | 65.33 | 65.81 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 45.62 | 49.02 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 60.22 | 46.61 |
| GSMUA_Achr10P... | Banana | nucleus | 36.13 | 43.42 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 20.44 | 36.6 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 24.09 | 35.29 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 23.36 | 34.22 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 23.72 | 30.23 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 33.58 | 29.02 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 33.21 | 27.74 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 31.75 | 27.36 |
| TraesCS7B01G402300.1 | Wheat | nucleus | 34.67 | 24.36 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 34.31 | 24.23 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 36.5 | 24.04 |
| TraesCS7A01G495100.1 | Wheat | nucleus | 36.5 | 23.87 |
| TraesCS7B01G402400.1 | Wheat | nucleus | 34.67 | 23.69 |
| TraesCS7B01G402200.1 | Wheat | nucleus | 35.77 | 23.5 |
| TraesCS7A01G494900.1 | Wheat | nucleus | 33.58 | 23.35 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 34.31 | 23.15 |
| TraesCS7A01G494800.1 | Wheat | nucleus | 33.21 | 22.81 |
| Os06t0659100-00 | Rice | nucleus | 35.4 | 22.77 |
| Zm00001d046906_P001 | Maize | nucleus | 35.04 | 22.64 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 23.36 | 22.46 |
| Zm00001d036692_P001 | Maize | nucleus | 34.67 | 21.89 |
| EER88765 | Sorghum | nucleus | 35.4 | 21.85 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 32.48 | 21.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.74 | 21.71 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 32.12 | 21.62 |
| TraesCS2B01G530400.1 | Wheat | nucleus | 32.12 | 21.57 |
| Os02t0177300-00 | Rice | nucleus | 36.5 | 21.37 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 32.12 | 21.36 |
| Zm00001d002005_P001 | Maize | nucleus | 31.02 | 21.3 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 34.67 | 21.21 |
| Zm00001d053756_P001 | Maize | nucleus | 31.39 | 21.18 |
| HORVU7Hr1G110980.3 | Barley | nucleus, plastid | 34.67 | 21.16 |
| Zm00001d015451_P001 | Maize | nucleus | 33.94 | 21.09 |
| EES11579 | Sorghum | nucleus | 30.66 | 21.0 |
| Zm00001d026491_P001 | Maize | nucleus | 30.29 | 20.96 |
| TraesCS6B01G180300.1 | Wheat | nucleus | 33.58 | 20.81 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 34.31 | 20.8 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 21.9 | 20.62 |
| Os04t0656500-01 | Rice | nucleus | 31.02 | 20.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.91 | 20.11 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 25.18 | 20.06 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 27.01 | 20.05 |
| OQU84482 | Sorghum | nucleus | 32.48 | 20.0 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 24.82 | 19.65 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 27.37 | 19.63 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 22.63 | 19.44 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 24.45 | 19.31 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 26.28 | 19.3 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 23.72 | 19.06 |
| HORVU6Hr1G030490.2 | Barley | nucleus, plastid | 33.94 | 18.94 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 24.82 | 18.89 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 24.09 | 18.49 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 24.82 | 18.43 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 22.99 | 18.37 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.82 | 18.28 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 26.64 | 17.68 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 25.18 | 17.56 |
| GSMUA_Achr11P... | Banana | nucleus | 26.28 | 17.35 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 21.9 | 17.34 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 21.9 | 17.14 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 25.55 | 17.03 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 23.72 | 16.75 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 26.64 | 16.67 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 26.28 | 16.63 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 25.18 | 16.59 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 27.01 | 16.3 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 27.74 | 16.2 |
| GSMUA_Achr10P... | Banana | nucleus | 28.1 | 15.28 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 25.18 | 15.07 |
| GSMUA_Achr10P... | Banana | nucleus | 26.64 | 14.99 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 24.82 | 14.66 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 24.82 | 12.9 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 10.95 | 12.2 |
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr7G05010_001 |
| EnsemblPlants:GSMUA_Achr7P05010_001 | EnsemblPlants:GSMUA_Achr7T05010_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0TEU1 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF34 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI000294EBB8 | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G05010_001]
Coordinates
chr7:-:3754531..3756212
Molecular Weight (calculated)
30406.1 Da
IEP (calculated)
10.140
GRAVY (calculated)
-0.593
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNRFSSAGA FVPSMTSFAG MEGSSRKHYT WNWETNSHNL QNHAFFPCTP FLDSPPPLVP TNSFHFFSPP PPEYPIGLVK MDDGGSGCGR IGLNLGHRTY
101: FSSGDALAMD RLLARSSGMH SLSSHQPRCQ AEGCKTDLSG AKHYHRRHKV CELHSKATVV VVGGLQQRFC QQCSRFHVLA EFDKAKRSCR KRLADHNRRR
201: RKPQLPPTTI TSPSKNTTTD ASEKSKQAQK TTGNNGDNHV LLLLLRPASD TGASLVLMHL YHSLEQQTPL VPQV
101: FSSGDALAMD RLLARSSGMH SLSSHQPRCQ AEGCKTDLSG AKHYHRRHKV CELHSKATVV VVGGLQQRFC QQCSRFHVLA EFDKAKRSCR KRLADHNRRR
201: RKPQLPPTTI TSPSKNTTTD ASEKSKQAQK TTGNNGDNHV LLLLLRPASD TGASLVLMHL YHSLEQQTPL VPQV
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.