Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11579 | Sorghum | nucleus | 88.72 | 88.5 |
| Zm00001d026491_P001 | Maize | nucleus | 81.95 | 82.58 |
| Os04t0656500-01 | Rice | nucleus | 76.44 | 73.32 |
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 9.52 | 59.38 |
| Bra032662.1-P | Field mustard | nucleus | 18.05 | 45.57 |
| GSMUA_Achr10P... | Banana | nucleus | 21.3 | 37.28 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 21.8 | 34.12 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 21.3 | 31.02 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 21.05 | 30.88 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 23.31 | 30.59 |
| KRH75288 | Soybean | nucleus | 21.55 | 29.97 |
| Zm00001d021573_P001 | Maize | mitochondrion | 15.29 | 29.61 |
| CDX90071 | Canola | nucleus | 23.06 | 29.49 |
| PGSC0003DMT400074976 | Potato | nucleus | 21.05 | 28.67 |
| Bra033221.1-P | Field mustard | nucleus | 23.56 | 28.66 |
| Solyc01g090730.2.1 | Tomato | nucleus | 21.3 | 28.43 |
| CDY38043 | Canola | nucleus | 23.81 | 28.36 |
| Solyc10g018780.1.1 | Tomato | nucleus | 20.8 | 28.33 |
| KRH66611 | Soybean | nucleus | 23.81 | 28.27 |
| KRH48747 | Soybean | nucleus | 23.81 | 28.11 |
| PGSC0003DMT400066955 | Potato | nucleus | 21.05 | 27.81 |
| AT1G02065.1 | Thale cress | nucleus | 23.06 | 27.63 |
| CDY15132 | Canola | nucleus | 15.79 | 27.04 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 23.56 | 26.55 |
| Zm00001d006451_P001 | Maize | mitochondrion | 16.29 | 25.59 |
| Zm00001d036692_P001 | Maize | nucleus | 27.32 | 25.12 |
| KRH07602 | Soybean | nucleus | 13.28 | 24.54 |
| Zm00001d053775_P001 | Maize | nucleus | 20.3 | 24.47 |
| Zm00001d015410_P002 | Maize | nucleus | 20.05 | 24.1 |
| Zm00001d046906_P001 | Maize | nucleus | 25.56 | 24.06 |
| Zm00001d053756_P001 | Maize | nucleus | 22.56 | 22.17 |
| Zm00001d012015_P001 | Maize | nucleus | 20.3 | 21.6 |
| Zm00001d015451_P001 | Maize | nucleus | 23.56 | 21.32 |
| Zm00001d006091_P001 | Maize | nucleus | 22.56 | 21.28 |
| Zm00001d031451_P001 | Maize | nucleus | 21.3 | 21.09 |
| Zm00001d052890_P001 | Maize | nucleus | 21.55 | 21.08 |
| Zm00001d020941_P001 | Maize | nucleus | 19.3 | 20.37 |
| Zm00001d006028_P001 | Maize | nucleus | 19.55 | 20.37 |
| Zm00001d042319_P001 | Maize | nucleus | 20.8 | 20.29 |
| Zm00001d026175_P001 | Maize | nucleus | 19.3 | 19.3 |
| Zm00001d021056_P001 | Maize | nucleus | 21.55 | 18.49 |
| Zm00001d049824_P002 | Maize | nucleus | 20.05 | 18.39 |
| Zm00001d049822_P001 | Maize | nucleus | 19.8 | 18.29 |
| Zm00001d053890_P003 | Maize | nucleus | 22.06 | 18.26 |
| Zm00001d014698_P001 | Maize | nucleus | 19.8 | 18.0 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 21.8 | 16.38 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | EntrezGene:542528 | UniProt:A0A1D6DVJ6 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | ProteinID:ONM12750.1 |
| PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF17 | InterPro:SBP_dom | InterPro:SBP_sf |
| SUPFAM:SSF103612 | UniParc:UPI0002218686 | EnsemblPlantsGene:Zm00001d002005 | EnsemblPlants:Zm00001d002005_P001 | EnsemblPlants:Zm00001d002005_T001 | SEG:seg |
Description
liguleless1Protein LIGULELESS 1
Coordinates
chr2:-:4230854..4234535
Molecular Weight (calculated)
43361.4 Da
IEP (calculated)
7.815
GRAVY (calculated)
-0.649
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNLSAAANG RDEFPPYVVP SNAAAPPPSL LPTMEQQQES SIHREHHQLL GYNLEANSLA LLPPSNAAAA HHHTTFAGGH SPHDILHFYP PPSAASHYLA
101: AAGGNPYSHL VSAPGTTFHQ TSSSYYPPAA AAQAAPEYYF PTLVSSAEEN MASFAATQLG LNLGYRTYFP PRGGYTYGHH PPRCQAEGCK ADLSSAKRYH
201: RRHKVCEHHS KAPVVVTAGG LHQRFCQQCS RFHLLDEFDD AKKSCRKRLA DHNRRRRKSK PSDADAGDKK RAHANKAAAA KDKAESSSKN MDIGDGLGAQ
301: ILGSALLSKE QDQAMDLGEV VKEAVDPKGK ASMQQHYGFP FHSSSAGSCF PQTQAVSSDT TSNIGQVQEP SLGFHHHQHH QHSNILQLGQ AMFDLDFDH
101: AAGGNPYSHL VSAPGTTFHQ TSSSYYPPAA AAQAAPEYYF PTLVSSAEEN MASFAATQLG LNLGYRTYFP PRGGYTYGHH PPRCQAEGCK ADLSSAKRYH
201: RRHKVCEHHS KAPVVVTAGG LHQRFCQQCS RFHLLDEFDD AKKSCRKRLA DHNRRRRKSK PSDADAGDKK RAHANKAAAA KDKAESSSKN MDIGDGLGAQ
301: ILGSALLSKE QDQAMDLGEV VKEAVDPKGK ASMQQHYGFP FHSSSAGSCF PQTQAVSSDT TSNIGQVQEP SLGFHHHQHH QHSNILQLGQ AMFDLDFDH
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.