Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97011 | Sorghum | nucleus | 90.78 | 82.76 |
| Zm00001d021056_P001 | Maize | nucleus | 87.47 | 79.57 |
| TraesCS5B01G286000.1 | Wheat | nucleus | 69.5 | 67.9 |
| TraesCS5D01G294400.1 | Wheat | nucleus | 68.79 | 67.36 |
| TraesCS5A01G286700.2 | Wheat | nucleus | 68.56 | 66.51 |
| Os09t0507100-00 | Rice | nucleus | 69.74 | 62.5 |
| HORVU5Hr1G076380.9 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 54.61 | 58.93 |
| Zm00001d049822_P001 | Maize | nucleus | 59.81 | 58.56 |
| Zm00001d049824_P002 | Maize | nucleus | 58.39 | 56.78 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.08 | 50.86 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 37.83 | 50.16 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.84 | 50.14 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.74 | 49.73 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 43.26 | 44.31 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 36.17 | 42.5 |
| GSMUA_Achr11P... | Banana | nucleus | 40.19 | 40.96 |
| Zm00001d012015_P001 | Maize | nucleus | 32.62 | 36.8 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 32.39 | 36.24 |
| Zm00001d042319_P001 | Maize | nucleus | 33.57 | 34.72 |
| KRG94562 | Soybean | nucleus | 29.79 | 34.52 |
| KRH06918 | Soybean | nucleus | 29.31 | 33.97 |
| Zm00001d021573_P001 | Maize | mitochondrion | 14.18 | 29.13 |
| Zm00001d015410_P002 | Maize | nucleus | 21.51 | 27.41 |
| Zm00001d053775_P001 | Maize | nucleus | 21.04 | 26.89 |
| Zm00001d006451_P001 | Maize | mitochondrion | 14.66 | 24.41 |
| Zm00001d020941_P001 | Maize | nucleus | 21.75 | 24.34 |
| Zm00001d026175_P001 | Maize | nucleus | 22.22 | 23.56 |
| Zm00001d006028_P001 | Maize | nucleus | 20.57 | 22.72 |
| Zm00001d002005_P001 | Maize | nucleus | 21.28 | 22.56 |
| Zm00001d052890_P001 | Maize | nucleus | 21.51 | 22.3 |
| Zm00001d031451_P001 | Maize | nucleus | 20.8 | 21.84 |
| Zm00001d026491_P001 | Maize | nucleus | 19.62 | 20.96 |
| Zm00001d046906_P001 | Maize | nucleus | 20.8 | 20.75 |
| Zm00001d036692_P001 | Maize | nucleus | 21.28 | 20.74 |
| Zm00001d015451_P001 | Maize | nucleus | 21.28 | 20.41 |
| Zm00001d014698_P001 | Maize | nucleus | 21.04 | 20.27 |
| Zm00001d053756_P001 | Maize | nucleus | 19.39 | 20.2 |
| Zm00001d053890_P003 | Maize | nucleus | 21.75 | 19.09 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 21.51 | 17.14 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 0.71 | 5.17 |
Protein Annotations
| EntrezGene:100279240 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | UniProt:A0A1D6ESU3 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | ProteinID:ONM22777.1 | PFAM:PF03110 | PFscan:PS51141 |
| PANTHER:PTHR31251 | PANTHER:PTHR31251:SF33 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0004DEC922 |
| EnsemblPlantsGene:Zm00001d006091 | EnsemblPlants:Zm00001d006091_P001 | EnsemblPlants:Zm00001d006091_T001 | SEG:seg | : | : |
Description
SBP-transcription factor 5Squamosa promoter-binding-like protein 6
Coordinates
chr2:+:197898982..197903861
Molecular Weight (calculated)
44399.0 Da
IEP (calculated)
7.184
GRAVY (calculated)
-0.383
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWDLKMPVS WDLPDLEHDA MPPPPPVSAA STAAASGIAA AAAAPSSATA PSRAECSVDL KLGGLGEFGA ADGTATKEPA AATAAPSASP MKRPRLGPGG
101: AGGAQCPSCA VDGCKADLSK CRDYHRRHKV CEAHSKTPVV VVAGREMRFC QQCSRFHLLL EFDEAKRSCR KRLDGHNRRR RKPQPDTMNS GSFMTSQQGT
201: RFSSFPAPRP EPSWSGVIKS EDSSYYTHHP VLSNRPHVAG TSTSPAYSKE GRRFPFLQDG DQVSFSASGA GTLEVSTVCQ PLLKTTAAVA PPPPESSKML
301: APVLDSDCAL SLLSSPANSS SVDVSRMVQP AERIPMAQPL VPGLQHHQFG GSPVPDWFAG SGAVPAAGTG GFACPHSVES EQFNTVLVPS SDGGHEMNYH
401: GIFHVGGEGS SDGTSPSLPF SWQ
101: AGGAQCPSCA VDGCKADLSK CRDYHRRHKV CEAHSKTPVV VVAGREMRFC QQCSRFHLLL EFDEAKRSCR KRLDGHNRRR RKPQPDTMNS GSFMTSQQGT
201: RFSSFPAPRP EPSWSGVIKS EDSSYYTHHP VLSNRPHVAG TSTSPAYSKE GRRFPFLQDG DQVSFSASGA GTLEVSTVCQ PLLKTTAAVA PPPPESSKML
301: APVLDSDCAL SLLSSPANSS SVDVSRMVQP AERIPMAQPL VPGLQHHQFG GSPVPDWFAG SGAVPAAGTG GFACPHSVES EQFNTVLVPS SDGGHEMNYH
401: GIFHVGGEGS SDGTSPSLPF SWQ
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.