Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049822_P001 | Maize | nucleus | 89.43 | 90.05 |
| KXG25534 | Sorghum | nucleus | 82.07 | 78.29 |
| HORVU0Hr1G039170.6 | Barley | nucleus | 62.76 | 68.25 |
| TraesCS7B01G158500.1 | Wheat | nucleus | 64.14 | 68.22 |
| TraesCS7A01G260500.1 | Wheat | nucleus | 63.68 | 68.06 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 64.14 | 67.39 |
| Os08t0531600-01 | Rice | nucleus | 63.91 | 61.1 |
| Zm00001d006091_P001 | Maize | nucleus | 56.78 | 58.39 |
| Zm00001d021056_P001 | Maize | nucleus | 58.39 | 54.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.08 | 48.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.85 | 45.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.78 | 45.33 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 33.1 | 45.14 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 39.77 | 41.89 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 31.95 | 38.61 |
| GSMUA_Achr11P... | Banana | nucleus | 36.78 | 38.55 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 30.34 | 34.92 |
| KRG94562 | Soybean | nucleus | 28.97 | 34.52 |
| Zm00001d012015_P001 | Maize | nucleus | 29.66 | 34.4 |
| KRH06918 | Soybean | nucleus | 28.05 | 33.42 |
| Zm00001d042319_P001 | Maize | nucleus | 30.57 | 32.52 |
| Zm00001d015410_P002 | Maize | nucleus | 21.15 | 27.71 |
| Zm00001d021573_P001 | Maize | mitochondrion | 13.1 | 27.67 |
| Zm00001d053775_P001 | Maize | nucleus | 20.69 | 27.19 |
| Zm00001d020941_P001 | Maize | nucleus | 20.92 | 24.07 |
| Zm00001d006028_P001 | Maize | nucleus | 20.92 | 23.76 |
| Zm00001d006451_P001 | Maize | mitochondrion | 13.33 | 22.83 |
| Zm00001d052890_P001 | Maize | nucleus | 20.69 | 22.06 |
| Zm00001d026175_P001 | Maize | nucleus | 20.23 | 22.06 |
| Zm00001d031451_P001 | Maize | nucleus | 19.77 | 21.34 |
| Zm00001d002005_P001 | Maize | nucleus | 18.39 | 20.05 |
| Zm00001d015451_P001 | Maize | nucleus | 19.77 | 19.5 |
| Zm00001d026491_P001 | Maize | nucleus | 17.7 | 19.44 |
| Zm00001d014698_P001 | Maize | nucleus | 19.54 | 19.36 |
| Zm00001d053756_P001 | Maize | nucleus | 17.93 | 19.21 |
| Zm00001d053890_P003 | Maize | nucleus | 20.92 | 18.88 |
| Zm00001d046906_P001 | Maize | nucleus | 18.16 | 18.63 |
| Zm00001d036692_P001 | Maize | nucleus | 18.39 | 18.43 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 20.0 | 16.38 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.61 | 12.07 |
Protein Annotations
| EntrezGene:103653214 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | UniProt:A0A1B1MQB5 | ProteinID:AQK51446.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | EMBL:KU131571 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF33 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI0004DE933F | EnsemblPlantsGene:Zm00001d049824 | EnsemblPlants:Zm00001d049824_P002 | EnsemblPlants:Zm00001d049824_T002 | SEG:seg | : |
Description
neighbor of tga1 neighbor of tga1
Coordinates
chr4:-:46625882..46630722
Molecular Weight (calculated)
45554.1 Da
IEP (calculated)
6.917
GRAVY (calculated)
-0.450
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWDLKAVGA WDLAELEQDH AAATAAAGPS EGHATDTAAA GTGTGTGTES RPPGAGAPAE CSVDLKLGGM GECELGAGAA TACREREAAA GATKRPRPAG
101: QQQQQCPSCA VDGCRADLSK CRDYHRRHKV CEAHSKTPVV VVAGREMRFC QQCSRFHLLA EFDADKRSCR KRLDGHNRRR RKPQPDTMAS ASSITSQQGT
201: RFSPFAPPRL EASWPGVMKT EESPYRITHQ IHLGSSSSSR QQHFVGAATS AYAKEGPRFP FLQEGEISFA TGVVLEPPAA APACQPLLKS GAPPPESSSA
301: GGGKMFSDQG LTRVLDSDCA LSLLSAPANY SGIDVSRMVR PTEHVPMAQQ LVVSGLQFGS ASWFPRPQAS TGGSFVSSCP AVQVEGEQQL NAVLGPNDSE
401: VSMNYGGMFH VGGGSGGGEG SSDGGTSSSM PFSWQ
101: QQQQQCPSCA VDGCRADLSK CRDYHRRHKV CEAHSKTPVV VVAGREMRFC QQCSRFHLLA EFDADKRSCR KRLDGHNRRR RKPQPDTMAS ASSITSQQGT
201: RFSPFAPPRL EASWPGVMKT EESPYRITHQ IHLGSSSSSR QQHFVGAATS AYAKEGPRFP FLQEGEISFA TGVVLEPPAA APACQPLLKS GAPPPESSSA
301: GGGKMFSDQG LTRVLDSDCA LSLLSAPANY SGIDVSRMVR PTEHVPMAQQ LVVSGLQFGS ASWFPRPQAS TGGSFVSSCP AVQVEGEQQL NAVLGPNDSE
401: VSMNYGGMFH VGGGSGGGEG SSDGGTSSSM PFSWQ
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.