Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015451_P001 | Maize | nucleus | 70.44 | 64.85 |
| OQU84482 | Sorghum | nucleus | 68.72 | 62.7 |
| Os02t0177300-00 | Rice | nucleus | 50.0 | 43.38 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 47.54 | 43.08 |
| Bra032662.1-P | Field mustard | nucleus | 16.75 | 43.04 |
| TraesCS6B01G180300.1 | Wheat | nucleus | 46.8 | 42.99 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 47.29 | 42.48 |
| Zm00001d046906_P001 | Maize | nucleus | 42.36 | 40.57 |
| Zm00001d036692_P001 | Maize | nucleus | 42.61 | 39.86 |
| HORVU6Hr1G030490.2 | Barley | nucleus, plastid | 46.06 | 38.09 |
| GSMUA_Achr10P... | Banana | nucleus | 20.69 | 36.84 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 21.67 | 34.51 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 21.67 | 32.35 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 21.18 | 31.39 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 22.41 | 29.93 |
| PGSC0003DMT400074976 | Potato | nucleus | 21.43 | 29.69 |
| CDX90071 | Canola | nucleus | 22.66 | 29.49 |
| Solyc10g018780.1.1 | Tomato | nucleus | 21.18 | 29.35 |
| Solyc01g090730.2.1 | Tomato | nucleus | 21.43 | 29.1 |
| CDY15132 | Canola | nucleus | 16.5 | 28.76 |
| Bra033221.1-P | Field mustard | nucleus | 23.15 | 28.66 |
| PGSC0003DMT400066955 | Potato | nucleus | 21.18 | 28.48 |
| KRH75288 | Soybean | nucleus | 19.95 | 28.22 |
| KRH66611 | Soybean | nucleus | 23.15 | 27.98 |
| KRH48747 | Soybean | nucleus | 22.91 | 27.51 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 23.89 | 27.4 |
| Zm00001d021573_P001 | Maize | mitochondrion | 13.79 | 27.18 |
| AT1G02065.1 | Thale cress | nucleus | 22.17 | 27.03 |
| CDY38043 | Canola | nucleus | 21.92 | 26.57 |
| KRH07602 | Soybean | nucleus | 13.79 | 25.93 |
| Zm00001d006451_P001 | Maize | mitochondrion | 14.78 | 23.62 |
| Zm00001d026491_P001 | Maize | nucleus | 22.41 | 22.98 |
| Zm00001d002005_P001 | Maize | nucleus | 22.17 | 22.56 |
| Zm00001d015410_P002 | Maize | nucleus | 17.24 | 21.08 |
| Zm00001d053775_P001 | Maize | nucleus | 16.75 | 20.54 |
| Zm00001d012015_P001 | Maize | nucleus | 18.47 | 20.0 |
| Zm00001d006091_P001 | Maize | nucleus | 20.2 | 19.39 |
| Zm00001d006028_P001 | Maize | nucleus | 17.98 | 19.06 |
| Zm00001d042319_P001 | Maize | nucleus | 18.72 | 18.58 |
| Zm00001d020941_P001 | Maize | nucleus | 17.24 | 18.52 |
| Zm00001d021056_P001 | Maize | nucleus | 20.69 | 18.06 |
| Zm00001d049824_P002 | Maize | nucleus | 19.21 | 17.93 |
| Zm00001d049822_P001 | Maize | nucleus | 18.97 | 17.82 |
| Zm00001d052890_P001 | Maize | nucleus | 17.73 | 17.65 |
| Zm00001d031451_P001 | Maize | nucleus | 17.49 | 17.62 |
| Zm00001d014698_P001 | Maize | nucleus | 18.47 | 17.08 |
| Zm00001d026175_P001 | Maize | nucleus | 16.75 | 17.04 |
| Zm00001d053890_P003 | Maize | nucleus | 17.98 | 15.15 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 17.73 | 13.56 |
Protein Annotations
| EntrezGene:100193719 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | ProteinID:AQK60283.1 | UniProt:B4FG20 | EMBL:BT036058 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF26 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI00017B6F86 | EnsemblPlantsGene:Zm00001d053756 | EnsemblPlants:Zm00001d053756_P001 | EnsemblPlants:Zm00001d053756_T001 | SEG:seg | : |
Description
SBP-domain protein2 SBP-domain protein2
Coordinates
chr4:-:240523216..240526731
Molecular Weight (calculated)
42603.9 Da
IEP (calculated)
8.738
GRAVY (calculated)
-0.265
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMMNTSAAM SPPSTDVVVD DFSLGAMHQP YVVGFHADAG MRIMPSVVVD RPLLQQNTDL LEEYDSFDFA ATGLLPLPFQ ELPGLLPPAN YLPLPTPSMA
101: MSPPSLRLLT LPGVPVPTAA ADVVYGGLGG GGAGGPSFLK REHGVGSGGG RIGGLNLGRR TYFTPAAVDR LLGGGLGGVG LGMSVLGLGV GAAHHHQQQP
201: PRCQAEGCKA DLSAAKHYHR RHKVCEFHTK ASAVAAAGKQ QRFCQQCSRF HVLAEFDEAK RSCRKRLTEH NRRRRKPISA QGNNDHSSPP PPAPKKADTC
301: ITTSYNDDPK IAGASNTAAA ISPNGGSGGG SCLDVLDNGQ ITSSATAAAP TALSLAAPPP PLHHELHHEK DGSLDSVLMQ RRVHYWSMAG GGTTTTKSIA
401: VSSPRW
101: MSPPSLRLLT LPGVPVPTAA ADVVYGGLGG GGAGGPSFLK REHGVGSGGG RIGGLNLGRR TYFTPAAVDR LLGGGLGGVG LGMSVLGLGV GAAHHHQQQP
201: PRCQAEGCKA DLSAAKHYHR RHKVCEFHTK ASAVAAAGKQ QRFCQQCSRF HVLAEFDEAK RSCRKRLTEH NRRRRKPISA QGNNDHSSPP PPAPKKADTC
301: ITTSYNDDPK IAGASNTAAA ISPNGGSGGG SCLDVLDNGQ ITSSATAAAP TALSLAAPPP PLHHELHHEK DGSLDSVLMQ RRVHYWSMAG GGTTTTKSIA
401: VSSPRW
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.