Factsheet for AT1G02065.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032662.1-P	Field mustard	nucleus	38.14	80.38
Bra033221.1-P	Field mustard	nucleus	73.27	74.39
CDX90071	Canola	nucleus	69.67	74.36
CDY38043	Canola	nucleus	69.97	69.55
CDY15132	Canola	nucleus	46.85	66.95
VIT_15s0021g02300.t01	Wine grape	nucleus	49.25	53.95
KRH66611	Soybean	nucleus	49.85	49.4
Solyc01g090730.2.1	Tomato	nucleus	43.54	48.49
KRH48747	Soybean	nucleus	48.95	48.22
PGSC0003DMT400066955	Potato	nucleus	43.24	47.68
PGSC0003DMT400074976	Potato	nucleus	41.74	47.44
Solyc10g018780.1.1	Tomato	nucleus	41.74	47.44
AT2G33810.1	Thale cress	nucleus	17.72	45.04
KRH75288	Soybean	nucleus	37.84	43.9
KRH07602	Soybean	nucleus	26.13	40.28
AT1G53160.1	Thale cress	nucleus	17.42	33.33
AT3G15270.1	Thale cress	nucleus	16.52	30.39
GSMUA_Achr4P24610_001	Banana	nucleus	29.73	30.18
GSMUA_Achr2P11940_001	Banana	nucleus	28.53	29.87
TraesCS7D01G482300.1	Wheat	nucleus	26.43	27.76
TraesCS7D01G482400.1	Wheat	nucleus	27.93	23.97
TraesCS7A01G494900.1	Wheat	nucleus	27.93	23.6
TraesCS2D01G502900.2	Wheat	nucleus	28.53	23.34
TraesCS2B01G530400.1	Wheat	nucleus	28.53	23.28
EES11579	Sorghum	nucleus	27.93	23.25
TraesCS7B01G402300.1	Wheat	nucleus	27.03	23.08
TraesCS6B01G180300.1	Wheat	nucleus	30.63	23.08
Zm00001d002005_P001	Maize	nucleus	27.63	23.06
TraesCS6D01G142100.1	Wheat	nucleus	31.23	23.01
Zm00001d026491_P001	Maize	nucleus	27.33	22.98
TraesCS7B01G402400.1	Wheat	nucleus	27.63	22.94
TraesCS7A01G495000.1	Wheat	nucleus	27.93	22.91
TraesCS7D01G482500.1	Wheat	nucleus	28.53	22.84
TraesCS2A01G502300.1	Wheat	nucleus	28.23	22.82
TraesCS7B01G402200.1	Wheat	nucleus	28.53	22.78
TraesCS6A01G152000.1	Wheat	nucleus	30.63	22.77
TraesCS7A01G495100.1	Wheat	nucleus	28.53	22.67
Os04t0656500-01	Rice	nucleus	28.23	22.6
Zm00001d015451_P001	Maize	nucleus	29.43	22.22
Zm00001d046906_P001	Maize	nucleus	28.23	22.17
Zm00001d053756_P001	Maize	nucleus	27.03	22.17
Zm00001d036692_P001	Maize	nucleus	28.23	21.66
TraesCS7A01G494800.1	Wheat	nucleus	25.83	21.55
EER88765	Sorghum	nucleus	28.53	21.4
TraesCS7D01G482200.1	Wheat	nucleus	26.13	21.32
Os06t0659100-00	Rice	nucleus	27.03	21.13
OQU84482	Sorghum	nucleus	27.93	20.9
Os02t0177300-00	Rice	nucleus	29.13	20.73
HORVU6Hr1G030490.2	Barley	nucleus, plastid	30.03	20.37
AT1G69170.1	Thale cress	nucleus	24.02	19.75
HORVU7Hr1G110980.3	Barley	nucleus, plastid	26.43	19.6
AT3G57920.1	Thale cress	nucleus	20.72	19.49
AT1G27360.1	Thale cress	nucleus	22.52	19.08
AT5G50570.2	Thale cress	nucleus	20.42	18.94
AT5G50670.2	Thale cress	nucleus	20.42	18.94
AT1G27370.1	Thale cress	nucleus	22.22	18.69
AT5G43270.1	Thale cress	nucleus	22.82	18.14
AT2G42200.1	Thale cress	nucleus	19.52	17.33
HORVU2Hr1G111620.1	Barley	cytosol, nucleus	1.8	9.38

Protein Annotations

MapMan:15.5.18	Gene3D:4.10.1100.10	EntrezGene:839275	UniProt:A0A178WH70	ProteinID:AEE27374.1	EMBL:AJ011642
EMBL:AK118174	ArrayExpress:AT1G02065	EnsemblPlantsGene:AT1G02065	RefSeq:AT1G02065	TAIR:AT1G02065	RefSeq:AT1G02065-TAIR-G
EnsemblPlants:AT1G02065.1	TAIR:AT1G02065.1	ProteinID:CAB56593.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007049	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009554	GO:GO:0009556	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0030154	GO:GO:0046872	GO:GO:0048653	InterPro:IPR004333
InterPro:IPR036893	RefSeq:NP_683267.1	ProteinID:OAP17680.1	PFAM:PF03110	PO:PO:0009046	PFscan:PS51141
PANTHER:PTHR31251	PANTHER:PTHR31251:SF4	UniProt:Q8GXL3	InterPro:SBP_dom	InterPro:SBP_sf	Symbol:SPL8
SUPFAM:SSF103612	EMBL:U89959	UniParc:UPI00000AC97B	SEG:seg	:	:

Description

SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]

Coordinates

chr1:+:365209..367443

Molecular Weight (calculated)

36828.9 Da

IEP (calculated)

8.886

GRAVY (calculated)

-0.872

Length

333 amino acids

Sequence
(BLAST)

001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.