Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P11940_001 | Banana | nucleus | 67.38 | 69.5 |
| Bra032662.1-P | Field mustard | nucleus | 21.34 | 44.3 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 20.12 | 35.29 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 32.62 | 35.2 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 28.96 | 34.93 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 15.85 | 33.99 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 26.22 | 33.73 |
| PGSC0003DMT400074976 | Potato | nucleus | 29.88 | 33.45 |
| GSMUA_Achr10P... | Banana | nucleus | 23.17 | 33.33 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 27.74 | 33.21 |
| Solyc10g018780.1.1 | Tomato | nucleus | 29.27 | 32.76 |
| CDX90071 | Canola | nucleus | 31.1 | 32.69 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 18.6 | 32.62 |
| KRH75288 | Soybean | nucleus | 28.35 | 32.4 |
| Solyc01g090730.2.1 | Tomato | nucleus | 29.27 | 32.11 |
| Bra033221.1-P | Field mustard | nucleus | 32.01 | 32.01 |
| CDY15132 | Canola | nucleus | 22.56 | 31.76 |
| KRH66611 | Soybean | nucleus | 32.32 | 31.55 |
| PGSC0003DMT400066955 | Potato | nucleus | 28.96 | 31.46 |
| KRH48747 | Soybean | nucleus | 32.01 | 31.07 |
| CDY38043 | Canola | nucleus | 30.49 | 29.85 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 19.51 | 29.77 |
| AT1G02065.1 | Thale cress | nucleus | 30.18 | 29.73 |
| KRH07602 | Soybean | nucleus | 18.6 | 28.24 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 28.35 | 26.27 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 20.43 | 23.51 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 24.09 | 22.97 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 23.48 | 22.25 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 23.17 | 21.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.26 | 20.86 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 18.29 | 20.62 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 23.17 | 20.6 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 19.51 | 20.06 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 20.73 | 19.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.34 | 19.83 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 23.17 | 19.59 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 21.65 | 19.24 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 19.82 | 18.95 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.34 | 18.82 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 20.43 | 18.61 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 19.82 | 18.57 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 21.04 | 18.5 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 19.21 | 18.16 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 18.9 | 17.92 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 22.26 | 17.68 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 23.48 | 17.58 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 21.95 | 17.31 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 20.73 | 17.3 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 22.56 | 17.09 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 23.48 | 16.96 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 23.48 | 16.81 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 21.04 | 16.79 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 19.51 | 16.75 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 23.78 | 16.63 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 22.56 | 15.95 |
| GSMUA_Achr11P... | Banana | nucleus | 20.12 | 15.9 |
| GSMUA_Achr10P... | Banana | nucleus | 22.87 | 14.88 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 23.78 | 14.8 |
| GSMUA_Achr10P... | Banana | nucleus | 21.65 | 14.58 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 10.37 | 13.82 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr4G24610_001 |
| EnsemblPlants:GSMUA_Achr4P24610_001 | EnsemblPlants:GSMUA_Achr4T24610_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0SRS2 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF4 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI000294D2B5 | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G24610_001]
Coordinates
chr4:+:24338665..24339736
Molecular Weight (calculated)
35666.3 Da
IEP (calculated)
9.026
GRAVY (calculated)
-0.399
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLDYEWGNP AAVTPAMLLF GEENGGDDLV RQQATVFDHF AGHGIGSGGS TDFFPQAQPL MAAAFFPAPT PASSTWHQRN GMEFPPLPAR IGLNLGVRTY
101: FSSASPADGG GVVTGRVCRR RTRIARCQAE GCSMELTHAK HYHRRHKVCE FHSKASVVNV AGLSQRFCQQ CSRFHVLTEF DQGKRSCRKR LADHNRRRRK
201: SQELATNTVT PIQNSDSSIT PIDTAVGNDL TEGDTILFTT SSRNTTAPTA FTRCKPENES PVTHMSPPRV PSMMLPLSTT RMAKEMALGI GCSSVRAGAS
301: STAENSPPGA PFLVQLGEFG VHHRSFTA
101: FSSASPADGG GVVTGRVCRR RTRIARCQAE GCSMELTHAK HYHRRHKVCE FHSKASVVNV AGLSQRFCQQ CSRFHVLTEF DQGKRSCRKR LADHNRRRRK
201: SQELATNTVT PIQNSDSSIT PIDTAVGNDL TEGDTILFTT SSRNTTAPTA FTRCKPENES PVTHMSPPRV PSMMLPLSTT RMAKEMALGI GCSSVRAGAS
301: STAENSPPGA PFLVQLGEFG VHHRSFTA
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.