Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90071 | Canola | nucleus | 90.99 | 67.95 |
| CDY38043 | Canola | nucleus | 72.53 | 50.45 |
| AT1G02065.1 | Thale cress | nucleus | 66.95 | 46.85 |
| KRH07602 | Soybean | nucleus | 34.76 | 37.5 |
| PGSC0003DMT400074976 | Potato | nucleus | 43.78 | 34.81 |
| Bra032662.1-P | Field mustard | nucleus | 23.61 | 34.81 |
| Solyc10g018780.1.1 | Tomato | nucleus | 42.92 | 34.13 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 44.21 | 33.88 |
| Solyc01g090730.2.1 | Tomato | nucleus | 42.92 | 33.44 |
| KRH66611 | Soybean | nucleus | 46.35 | 32.14 |
| PGSC0003DMT400066955 | Potato | nucleus | 41.63 | 32.12 |
| KRH48747 | Soybean | nucleus | 45.06 | 31.07 |
| KRH75288 | Soybean | nucleus | 37.34 | 30.31 |
| CDY27935 | Canola | nucleus | 17.17 | 27.21 |
| CDY57212 | Canola | nucleus | 16.31 | 26.95 |
| CDY17204 | Canola | nucleus | 16.31 | 26.76 |
| CDY37684 | Canola | nucleus | 15.45 | 25.53 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 31.76 | 22.56 |
| CDY24113 | Canola | nucleus | 15.45 | 22.36 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 30.47 | 22.33 |
| CDY50515 | Canola | nucleus | 15.02 | 22.29 |
| CDY20128 | Canola | nucleus | 15.45 | 20.45 |
| CDX79544 | Canola | nucleus | 16.31 | 20.32 |
| CDX97645 | Canola | nucleus | 15.45 | 20.11 |
| CDY61210 | Canola | nucleus | 15.45 | 20.11 |
| CDY32310 | Canola | nucleus | 15.02 | 19.89 |
| CDY25876 | Canola | nucleus | 15.02 | 19.89 |
| CDX98540 | Canola | nucleus | 15.02 | 19.55 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 24.89 | 18.3 |
| TraesCS6B01G180300.1 | Wheat | nucleus | 31.76 | 16.74 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 32.19 | 16.59 |
| Zm00001d053756_P001 | Maize | nucleus | 28.76 | 16.5 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 31.33 | 16.29 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 27.04 | 16.24 |
| Os04t0656500-01 | Rice | nucleus | 28.76 | 16.11 |
| EES11579 | Sorghum | nucleus | 27.47 | 16.0 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 27.9 | 15.97 |
| TraesCS2B01G530400.1 | Wheat | nucleus | 27.9 | 15.93 |
| Zm00001d026491_P001 | Maize | nucleus | 27.04 | 15.91 |
| Zm00001d015451_P001 | Maize | nucleus | 30.04 | 15.87 |
| Zm00001d046906_P001 | Maize | nucleus | 28.76 | 15.8 |
| Zm00001d002005_P001 | Maize | nucleus | 27.04 | 15.79 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 27.9 | 15.78 |
| TraesCS7B01G402300.1 | Wheat | nucleus | 26.18 | 15.64 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 27.04 | 15.52 |
| CDY27612 | Canola | nucleus | 21.89 | 15.5 |
| TraesCS7B01G402400.1 | Wheat | nucleus | 26.61 | 15.46 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 27.47 | 15.38 |
| TraesCS7A01G495100.1 | Wheat | nucleus | 27.47 | 15.27 |
| TraesCS7A01G494900.1 | Wheat | nucleus | 25.75 | 15.23 |
| Os02t0177300-00 | Rice | nucleus | 30.47 | 15.17 |
| CDX84928 | Canola | nucleus | 23.61 | 15.11 |
| TraesCS7B01G402200.1 | Wheat | nucleus | 27.04 | 15.11 |
| CDY27611 | Canola | nucleus | 23.61 | 15.07 |
| OQU84482 | Sorghum | nucleus | 28.76 | 15.06 |
| Zm00001d036692_P001 | Maize | nucleus | 27.9 | 14.98 |
| HORVU6Hr1G030490.2 | Barley | nucleus, plastid | 31.33 | 14.87 |
| EER88765 | Sorghum | nucleus | 28.33 | 14.86 |
| Os06t0659100-00 | Rice | nucleus | 27.04 | 14.79 |
| CDX95958 | Canola | nucleus | 18.88 | 14.72 |
| TraesCS7A01G494800.1 | Wheat | nucleus | 24.89 | 14.54 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 25.32 | 14.46 |
| CDY67700 | Canola | nucleus | 21.46 | 14.45 |
| CDY61750 | Canola | nucleus | 18.88 | 14.29 |
| CDX84927 | Canola | nucleus | 22.32 | 14.17 |
| CDY11816 | Canola | nucleus | 21.89 | 13.97 |
| CDY15713 | Canola | nucleus | 23.18 | 13.85 |
| CDY15712 | Canola | nucleus | 21.89 | 13.64 |
| CDY69014 | Canola | nucleus | 18.45 | 13.48 |
| CDY03914 | Canola | nucleus | 21.46 | 13.44 |
| CDY43604 | Canola | nucleus | 21.89 | 13.25 |
| CDX98259 | Canola | nucleus | 18.45 | 13.23 |
| CDY03913 | Canola | nucleus | 21.03 | 13.21 |
| CDY50300 | Canola | nucleus | 18.45 | 13.11 |
| CDY32959 | Canola | nucleus | 21.89 | 13.08 |
| CDY47656 | Canola | nucleus | 18.03 | 12.96 |
| HORVU7Hr1G110980.3 | Barley | nucleus, plastid | 24.89 | 12.92 |
| CDX81606 | Canola | nucleus | 18.45 | 12.91 |
| CDX96251 | Canola | nucleus | 18.03 | 12.8 |
| CDX79888 | Canola | nucleus | 19.74 | 12.5 |
| CDY53504 | Canola | nucleus | 19.74 | 12.43 |
| CDY06881 | Canola | nucleus | 18.88 | 12.12 |
| CDX84872 | Canola | nucleus | 17.17 | 11.73 |
| CDX67715 | Canola | nucleus | 15.88 | 11.71 |
| CDY34028 | Canola | nucleus | 17.17 | 11.49 |
| CDY14818 | Canola | nucleus | 18.03 | 11.44 |
| CDY45826 | Canola | nucleus | 16.74 | 11.44 |
| CDX71667 | Canola | nucleus | 17.17 | 11.14 |
| CDY47812 | Canola | nucleus | 22.32 | 10.08 |
| CDY22356 | Canola | nucleus | 21.89 | 9.83 |
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 2.15 | 7.81 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.29 | 5.17 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:A0A078FQK2 | UniProt:A0A078FQK2 | EnsemblPlants:CDY15132 | ProteinID:CDY15132 |
| ProteinID:CDY15132.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00085301001 | InterPro:IPR004333 |
| InterPro:IPR036893 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF4 | InterPro:SBP_dom |
| InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0004EF39F9 | : | : | : |
Description
BnaC05g00110DBnaC05g00110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQK2]
Coordinates
chrLK032052:+:37524..38549
Molecular Weight (calculated)
26470.5 Da
IEP (calculated)
7.480
GRAVY (calculated)
-0.648
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDYEWDNPS VIMLSGEDRS HHRQQEPDPT RVLSIFDPTQ THHSQSSYSN TCPPLFSSFS NQQHLTVYGH QTSNQFHPSF VYDSRTTNHL YAPSSDSIYG
101: HPHHSALFSF DQTWSGGSGS SYNFLIPKAE VDVSRPLDFT SNRIGLNLGG RTYFSAADGD FVSRLTPRCQ AEGCNADLSH AKHYHRRHKV CEFHSKASTV
201: VAAGLSQRFC QQCSRFTRRM INEWIIITLN SNH
101: HPHHSALFSF DQTWSGGSGS SYNFLIPKAE VDVSRPLDFT SNRIGLNLGG RTYFSAADGD FVSRLTPRCQ AEGCNADLSH AKHYHRRHKV CEFHSKASTV
201: VAAGLSQRFC QQCSRFTRRM INEWIIITLN SNH
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.