Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G402300.1 | Wheat | nucleus | 92.78 | 92.31 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 93.56 | 89.41 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 72.94 | 89.27 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 85.82 | 80.05 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 80.41 | 76.47 |
| Zm00001d046906_P001 | Maize | nucleus | 67.78 | 62.03 |
| Os06t0659100-00 | Rice | nucleus | 68.04 | 61.97 |
| EER88765 | Sorghum | nucleus | 70.88 | 61.94 |
| Zm00001d036692_P001 | Maize | nucleus | 66.24 | 59.22 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 51.03 | 43.81 |
| Bra032662.1-P | Field mustard | nucleus | 17.27 | 42.41 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 24.23 | 36.86 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 25.77 | 36.76 |
| TraesCS2D01G232800.1 | Wheat | nucleus | 18.04 | 36.46 |
| GSMUA_Achr10P... | Banana | nucleus | 20.62 | 35.09 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 24.23 | 34.31 |
| PGSC0003DMT400074976 | Potato | nucleus | 23.45 | 31.06 |
| Solyc10g018780.1.1 | Tomato | nucleus | 23.2 | 30.72 |
| KRH75288 | Soybean | nucleus | 22.42 | 30.31 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 23.71 | 30.26 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 27.58 | 30.23 |
| PGSC0003DMT400066955 | Potato | nucleus | 23.2 | 29.8 |
| Solyc01g090730.2.1 | Tomato | nucleus | 22.94 | 29.77 |
| CDX90071 | Canola | nucleus | 23.71 | 29.49 |
| Bra033221.1-P | Field mustard | nucleus | 24.48 | 28.96 |
| KRH48747 | Soybean | nucleus | 24.74 | 28.4 |
| KRH66611 | Soybean | nucleus | 24.48 | 28.27 |
| AT1G02065.1 | Thale cress | nucleus | 23.97 | 27.93 |
| CDY38043 | Canola | nucleus | 23.97 | 27.76 |
| CDY15132 | Canola | nucleus | 16.24 | 27.04 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 27.84 | 26.54 |
| KRH07602 | Soybean | nucleus | 13.92 | 25.0 |
| TraesCS2D01G410700.1 | Wheat | nucleus | 20.1 | 21.97 |
| TraesCS6D01G145200.1 | Wheat | nucleus | 18.3 | 21.85 |
| TraesCS5D01G273900.2 | Wheat | nucleus | 22.94 | 21.81 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 22.42 | 21.01 |
| TraesCS7D01G245200.2 | Wheat | nucleus | 20.36 | 20.52 |
| TraesCS3D01G425800.1 | Wheat | nucleus | 21.65 | 20.05 |
| TraesCS5D01G294400.1 | Wheat | nucleus | 21.65 | 19.44 |
| TraesCS6D01G098500.1 | Wheat | nucleus | 20.62 | 16.91 |
| TraesCS4D01G332700.1 | Wheat | nucleus | 4.12 | 7.31 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G482400.1 | EnsemblPlantsGene:TraesCS7D01G482400 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR004333 |
| InterPro:IPR036893 | InterPro:SBP_dom | InterPro:SBP_sf | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF34 | PFAM:PF03110 |
| PFscan:PS51141 | SEG:seg | SUPFAM:SSF103612 | MapMan:15.5.18 | : | : |
Description
No Description!
Coordinates
chr7D:+:592816295..592819560
Molecular Weight (calculated)
41773.2 Da
IEP (calculated)
8.587
GRAVY (calculated)
-0.589
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSGGRMNAA ASDDFPFAAM QPPPYVGFEH AGGGGQRHQG AMMYDNFDFA AAADAFGQFQ DAPHHQMLAL PPSGNGAGGL VPMAPPPMPG MQLQMPPMAM
101: HGHGDVYPAM GMVKREGDAG RIGLNLGRRT YFSPGDMMAV DRVLMRSRLG GVFGLGFGRG HHQAPRCQVE DCRADLSGAK HYHRRHKVCE YHAKASLVSA
201: AGKQQRFCQQ CSRFHVLTEF DEAKRSCRRR LAEHNRRRRK PAAGSTAASS KDSAPPSKKP NAGAISSSYT ADNNTLSTTK STISSNTSAI SCLQQGQAGA
301: VAPTRPTTLT LGASPENDDH QQQLHHHQEQ QHFITSLLHN NINNSNILSC SSVSSSTMPS AAAANGEVSD QNNDNANNNM HMFEVDFM
101: HGHGDVYPAM GMVKREGDAG RIGLNLGRRT YFSPGDMMAV DRVLMRSRLG GVFGLGFGRG HHQAPRCQVE DCRADLSGAK HYHRRHKVCE YHAKASLVSA
201: AGKQQRFCQQ CSRFHVLTEF DEAKRSCRRR LAEHNRRRRK PAAGSTAASS KDSAPPSKKP NAGAISSSYT ADNNTLSTTK STISSNTSAI SCLQQGQAGA
301: VAPTRPTTLT LGASPENDDH QQQLHHHQEQ QHFITSLLHN NINNSNILSC SSVSSSTMPS AAAANGEVSD QNNDNANNNM HMFEVDFM
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.