Factsheet for Os06t0659100-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G482300.1	Wheat	nucleus	51.41	69.09
TraesCS7D01G482400.1	Wheat	nucleus	61.97	68.04
TraesCS7A01G495100.1	Wheat	nucleus	66.9	68.02
TraesCS7D01G482500.1	Wheat	nucleus	66.2	67.79
TraesCS7A01G495000.1	Wheat	nucleus	64.55	67.73
TraesCS7B01G402200.1	Wheat	nucleus	65.96	67.39
TraesCS7B01G402300.1	Wheat	nucleus	61.27	66.92
EER88765	Sorghum	nucleus	68.54	65.77
Zm00001d046906_P001	Maize	nucleus	64.79	65.09
TraesCS7A01G494900.1	Wheat	nucleus	60.09	64.97
Zm00001d036692_P001	Maize	nucleus	64.55	63.36
TraesCS7D01G482200.1	Wheat	nucleus	57.75	60.29
TraesCS7B01G402400.1	Wheat	nucleus	55.63	59.1
TraesCS7A01G494800.1	Wheat	nucleus	53.99	57.64
HORVU7Hr1G110980.3	Barley	nucleus, plastid	60.33	57.24
Os02t0177300-00	Rice	nucleus	48.59	44.23
Bra032662.1-P	Field mustard	nucleus	15.96	43.04
GSMUA_Achr3P00810_001	Banana	nucleus	23.47	39.22
GSMUA_Achr10P...	Banana	nucleus	20.19	37.72
GSMUA_Achr4P20590_001	Banana	nucleus	22.77	35.66
GSMUA_Achr7P05010_001	Banana	nucleus	22.77	35.4
GSMUA_Achr7P08750_001	Banana	nucleus	27.0	32.49
Os07t0505200-01	Rice	nucleus	16.2	31.94
PGSC0003DMT400074976	Potato	nucleus	21.36	31.06
Solyc10g018780.1.1	Tomato	nucleus	21.13	30.72
VIT_15s0021g02300.t01	Wine grape	nucleus	21.83	30.59
PGSC0003DMT400066955	Potato	nucleus	21.13	29.8
Solyc01g090730.2.1	Tomato	nucleus	20.89	29.77
KRH75288	Soybean	nucleus	19.72	29.27
KRH66611	Soybean	nucleus	22.54	28.57
CDX90071	Canola	nucleus	20.89	28.53
KRH48747	Soybean	nucleus	22.54	28.4
Bra033221.1-P	Field mustard	nucleus	21.83	28.35
CDY38043	Canola	nucleus	21.83	27.76
CDY15132	Canola	nucleus	14.79	27.04
AT1G02065.1	Thale cress	nucleus	21.13	27.03
Os04t0656500-01	Rice	nucleus	25.82	26.44
KRH07602	Soybean	nucleus	12.91	25.46
Os02t0174100-02	Rice	nucleus	14.08	23.9
Os02t0139400-01	Rice	nucleus	15.73	23.76
Os04t0551500-01	Rice	nucleus	18.78	22.22
Os09t0507100-00	Rice	nucleus	21.6	19.49
Os08t0509600-01	Rice	nucleus	18.54	18.94
Os01t0922600-01	Rice	nucleus	13.62	18.65
Os08t0531600-01	Rice	nucleus	19.72	18.46
Os09t0491532-01	Rice	nucleus	13.85	18.27
Os06t0663500-00	Rice	nucleus	14.55	18.08
Os06t0703500-02	Rice	nucleus	19.25	17.26

Protein Annotations

MapMan:15.5.18	Gene3D:4.10.1100.10	EntrezGene:4341729	ProteinID:BAD38344.1	ProteinID:BAF20175.1	ProteinID:BAS98962.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0046872	InterPro:IPR004333	InterPro:IPR036893
EnsemblPlantsGene:Os06g0659100	EnsemblPlants:Os06t0659100-00	PFAM:PF03110	PFscan:PS51141	PANTHER:PTHR31251	PANTHER:PTHR31251:SF34
UniProt:Q0DAE8	InterPro:SBP_dom	InterPro:SBP_sf	SUPFAM:SSF103612	UniParc:UPI0000E128EE	RefSeq:XP_015642406.1
SEG:seg	:	:	:	:	:

Description

RICE SQUAMOSA PROMOTER-BINDING-LIKE 10Similar to Squamosa-promoter binding protein 1. (Os06t0659100-00)

Coordinates

chr6:+:27114925..27117096

Molecular Weight (calculated)

44294.6 Da

IEP (calculated)

9.130

GRAVY (calculated)

-0.385

Length

426 amino acids

Sequence
(BLAST)

001: MMSGRMNAAG DESPFPFGAM QAPGPGAYVG FDHGAAAVAA AAAAAQRAGM LQHHHHHMYD GLDFAAAMQF GGGQDAPPHP QLLALPPSMA APPPPPMPMP
101: LQMPMTMPMP GDVYPALGIV KREGGGGGQD AAAGRIGLNL GRRTYFSPGD MLAVDRLLMR SRLGGVFGLG FGGAHHQPPR CQAEGCKADL SGAKHYHRRH
201: KVCEYHAKAS VVAASGKQQR FCQQCSRFHV LTEFDEAKRS CRKRLAEHNR RRRKPAAAAT TAVAAAKDAA AAPVAAGKKP SGGAATSYTG DNKNVVSMSA
301: AKSPISSNTS VISCLPEQGK HAAAAARPTA LTLGGAPPHE SSAPQIGAML HHHHHHQQDH MQVSSLVHIN GGGGGGSNNI LSCSSVCSSA LPSTATNGEV
401: SDQNNDNSHN NGGNNNNMHL FEVDFM

Best Arabidopsis Sequence Match ( AT1G02065.1 )
(BLAST)

001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG

Arabidopsis Description

SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.