Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G246500.1 | Wheat | nucleus | 60.19 | 65.03 |
| TraesCS7B01G144900.1 | Wheat | nucleus | 59.71 | 64.51 |
| TraesCS7D01G245200.2 | Wheat | nucleus | 58.75 | 63.64 |
| Os09t0491532-01 | Rice | nucleus | 48.68 | 62.85 |
| Zm00001d020941_P001 | Maize | nucleus | 55.16 | 60.85 |
| EER99092 | Sorghum | nucleus | 55.88 | 60.05 |
| Zm00001d006028_P001 | Maize | nucleus | 51.32 | 55.87 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 41.49 | 50.0 |
| Os07t0505200-01 | Rice | nucleus | 17.99 | 34.72 |
| KRG95361 | Soybean | nucleus | 29.5 | 34.26 |
| KRH67040 | Soybean | nucleus | 29.02 | 32.97 |
| KRH38141 | Soybean | nucleus, plastid | 28.78 | 32.17 |
| KRH71914 | Soybean | nucleus, plastid | 27.34 | 31.84 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 28.3 | 31.13 |
| CDX98259 | Canola | nucleus | 23.98 | 30.77 |
| Solyc10g078700.1.1 | Tomato | nucleus | 27.1 | 30.38 |
| PGSC0003DMT400029751 | Potato | nucleus | 27.1 | 30.38 |
| CDY47656 | Canola | nucleus | 23.26 | 29.94 |
| Bra003305.1-P | Field mustard | nucleus | 22.54 | 29.75 |
| Bra016891.1-P | Field mustard | nucleus | 25.66 | 29.48 |
| CDY06881 | Canola | nucleus | 25.66 | 29.48 |
| AT2G42200.1 | Thale cress | nucleus | 26.38 | 29.33 |
| CDY61750 | Canola | nucleus | 21.58 | 29.22 |
| CDX67715 | Canola | nucleus | 22.06 | 29.11 |
| CDX79888 | Canola | nucleus | 25.66 | 29.08 |
| CDY53504 | Canola | nucleus | 25.66 | 28.92 |
| CDY14818 | Canola | nucleus | 25.42 | 28.88 |
| Os02t0174100-02 | Rice | nucleus | 17.03 | 28.29 |
| Bra004674.1-P | Field mustard | nucleus | 24.7 | 27.91 |
| AT3G57920.1 | Thale cress | nucleus | 23.5 | 27.68 |
| Bra014599.1-P | Field mustard | nucleus | 19.66 | 27.15 |
| Os02t0139400-01 | Rice | nucleus | 17.75 | 26.24 |
| Os04t0551500-01 | Rice | nucleus | 21.1 | 24.44 |
| Os01t0922600-01 | Rice | nucleus | 17.75 | 23.79 |
| Os06t0663500-00 | Rice | nucleus | 19.18 | 23.32 |
| Os04t0656500-01 | Rice | nucleus | 23.26 | 23.32 |
| Os08t0531600-01 | Rice | nucleus | 21.58 | 19.78 |
| Os09t0507100-00 | Rice | nucleus | 21.58 | 19.07 |
| Os06t0659100-00 | Rice | nucleus | 18.94 | 18.54 |
| Os06t0703500-02 | Rice | nucleus | 20.86 | 18.32 |
| Os02t0177300-00 | Rice | nucleus | 18.7 | 16.67 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | EMBL:AK107191 | ProteinID:BAD10674.1 | ProteinID:BAD10733.1 | ProteinID:BAF24118.1 |
| ProteinID:BAT06187.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046872 | InterPro:IPR004333 |
| InterPro:IPR036893 | EnsemblPlantsGene:Os08g0509600 | EnsemblPlants:Os08t0509600-01 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 |
| PANTHER:PTHR31251:SF67 | UniProt:Q7EXZ2 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI000023B13E |
| SEG:seg | : | : | : | : | : |
Description
WEALTHY FARMER'S PANICLESquamosa promter-binding-like transcription activator, Regulation of branching in panicles and vegetative shoots, Semidominant regulator of plant architecture (Os08t0509600-01)
Coordinates
chr8:-:25274541..25278696
Molecular Weight (calculated)
42381.2 Da
IEP (calculated)
9.624
GRAVY (calculated)
-0.495
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMASGGGAA AAAGGGVGGS GGGGGGGDEH RQLHGLKFGK KIYFEDAAAA AGGGGTGSGS GSASAAPPSS SSKAAGGGRG GGGKNKGKGV AAAAPPPPPP
101: PPRCQVEGCG ADLSGIKNYY CRHKVCFMHS KAPRVVVAGL EQRFCQQCSR FHLLPEFDQG KRSCRRRLAG HNERRRRPQT PLASRYGRLA ASVGEHRRFR
201: SFTLDFSYPR VPSSVRNAWP AIQPGDRISG GIQWHRNVAP HGHSSAVAGY GANTYSGQGS SSSGPPVFAG PNLPPGGCLA GVGAATDSSC ALSLLSTQPW
301: DTTTHSAAAS HNQAAAMSTT TSFDGNPVAP SAMAGSYMAP SPWTGSRGHE GGGRSVAHQL PHEVSLDEVH PGPSHHAHFS GELELALQGN GPAPAPRIDP
401: GSGSTFDQTS NTMDWSL
101: PPRCQVEGCG ADLSGIKNYY CRHKVCFMHS KAPRVVVAGL EQRFCQQCSR FHLLPEFDQG KRSCRRRLAG HNERRRRPQT PLASRYGRLA ASVGEHRRFR
201: SFTLDFSYPR VPSSVRNAWP AIQPGDRISG GIQWHRNVAP HGHSSAVAGY GANTYSGQGS SSSGPPVFAG PNLPPGGCLA GVGAATDSSC ALSLLSTQPW
301: DTTTHSAAAS HNQAAAMSTT TSFDGNPVAP SAMAGSYMAP SPWTGSRGHE GGGRSVAHQL PHEVSLDEVH PGPSHHAHFS GELELALQGN GPAPAPRIDP
401: GSGSTFDQTS NTMDWSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.