Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020941_P001 | Maize | nucleus | 84.28 | 86.51 |
| Zm00001d006028_P001 | Maize | nucleus | 81.44 | 82.51 |
| Os09t0491532-01 | Rice | nucleus | 59.54 | 71.52 |
| TraesCS7A01G246500.1 | Wheat | nucleus | 61.86 | 62.18 |
| TraesCS7B01G144900.1 | Wheat | nucleus | 61.08 | 61.4 |
| TraesCS7D01G245200.2 | Wheat | nucleus | 59.79 | 60.26 |
| Os08t0509600-01 | Rice | nucleus | 60.05 | 55.88 |
| EES14266 | Sorghum | nucleus | 57.99 | 55.01 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 44.07 | 49.42 |
| KRG95361 | Soybean | nucleus | 32.73 | 35.38 |
| KRH67040 | Soybean | nucleus | 32.47 | 34.33 |
| KRH71914 | Soybean | nucleus, plastid | 31.44 | 34.08 |
| KRH38141 | Soybean | nucleus, plastid | 31.44 | 32.71 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 31.7 | 32.45 |
| EER97257 | Sorghum | nucleus | 17.53 | 31.63 |
| PGSC0003DMT400029751 | Potato | nucleus | 29.9 | 31.18 |
| CDY06881 | Canola | nucleus | 29.12 | 31.13 |
| Bra016891.1-P | Field mustard | nucleus | 29.12 | 31.13 |
| CDY14818 | Canola | nucleus | 29.12 | 30.79 |
| Solyc10g078700.1.1 | Tomato | nucleus | 29.38 | 30.65 |
| CDX98259 | Canola | nucleus | 25.0 | 29.85 |
| CDX79888 | Canola | nucleus | 28.09 | 29.62 |
| CDY53504 | Canola | nucleus | 28.09 | 29.46 |
| AT2G42200.1 | Thale cress | nucleus | 28.35 | 29.33 |
| Bra003305.1-P | Field mustard | nucleus | 23.45 | 28.8 |
| Bra004674.1-P | Field mustard | nucleus | 27.32 | 28.73 |
| CDY61750 | Canola | nucleus | 22.42 | 28.25 |
| CDX67715 | Canola | nucleus | 22.94 | 28.16 |
| CDY47656 | Canola | nucleus | 22.94 | 27.47 |
| AT3G57920.1 | Thale cress | nucleus | 24.23 | 26.55 |
| Bra014599.1-P | Field mustard | nucleus | 20.36 | 26.16 |
| KXG36284 | Sorghum | nucleus | 13.92 | 24.77 |
| EES04609 | Sorghum | nucleus | 20.36 | 23.44 |
| EES11232 | Sorghum | nucleus | 24.48 | 22.73 |
| EES11579 | Sorghum | nucleus | 22.16 | 21.5 |
| EES01979 | Sorghum | nucleus | 22.16 | 21.34 |
| KXG25534 | Sorghum | nucleus | 23.71 | 20.18 |
| EER97011 | Sorghum | nucleus | 23.45 | 19.61 |
| OQU77017 | Sorghum | nucleus | 21.91 | 19.32 |
| EES04495 | Sorghum | nucleus | 23.71 | 19.17 |
| EER88765 | Sorghum | nucleus | 19.59 | 17.12 |
| OQU84482 | Sorghum | nucleus | 18.56 | 16.18 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | EntrezGene:8064852 | UniProt:C5X3X7 | EnsemblPlants:EER99092 | ProteinID:EER99092 |
| ProteinID:EER99092.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 |
| PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF59 | InterPro:SBP_dom | InterPro:SBP_sf |
| EnsemblPlantsGene:SORBI_3002G247800 | SUPFAM:SSF103612 | UniParc:UPI0001A84289 | RefSeq:XP_002462571.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:-:63576564..63580059
Molecular Weight (calculated)
40726.3 Da
IEP (calculated)
8.703
GRAVY (calculated)
-0.511
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGGSGSDD VHGLTFGKKI YFEQDAAVAA AGGSGSGSAT AAAGGRKGKG VATGGGRPAS ASAASATQPP RCQVDGCGVD LSAVKQYYCR HKVCYMHSKE
101: PRVVVAGIEQ RFCQQCSRFH QLPEFDQGKR SCRRRLIGHN ERRRKPPPGP LTSRYGRLAA SFQEPGRFRS FLLDFSYPRV PSSVRDAWQG VQPGGDRMLG
201: TIQWHGNQEP HPHRSAAAGY GNHAYNCHGG LVAGASMLPS AFELPPGGCV AGVTTDSSCA LSLLSTQPWD TTPQSGSHNR SPAMSAAASA FEGTPVAPSV
301: MASSYTASST WTASRDPADG ARNAQQHHDD ALHLVHPGPV HHGHFSGELE LALQGSGPPP PPNMPHVDHG SSSGTFSHST TNAMNWSL
101: PRVVVAGIEQ RFCQQCSRFH QLPEFDQGKR SCRRRLIGHN ERRRKPPPGP LTSRYGRLAA SFQEPGRFRS FLLDFSYPRV PSSVRDAWQG VQPGGDRMLG
201: TIQWHGNQEP HPHRSAAAGY GNHAYNCHGG LVAGASMLPS AFELPPGGCV AGVTTDSSCA LSLLSTQPWD TTPQSGSHNR SPAMSAAASA FEGTPVAPSV
301: MASSYTASST WTASRDPADG ARNAQQHHDD ALHLVHPGPV HHGHFSGELE LALQGSGPPP PPNMPHVDHG SSSGTFSHST TNAMNWSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.