Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006451_P001 | Maize | mitochondrion | 87.91 | 74.41 |
| TraesCS2B01G250900.1 | Wheat | nucleus | 58.6 | 65.62 |
| TraesCS2D01G232800.1 | Wheat | nucleus | 58.14 | 65.1 |
| TraesCS2A01G232400.1 | Wheat | nucleus | 58.14 | 65.1 |
| Os07t0505200-01 | Rice | nucleus | 60.0 | 59.72 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 44.19 | 50.8 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 43.72 | 50.27 |
| HORVU2Hr1G048280.2 | Barley | plastid | 44.65 | 49.23 |
| VIT_10s0003g00050.t01 | Wine grape | nucleus | 30.7 | 47.14 |
| VIT_12s0028g03350.t01 | Wine grape | nucleus | 36.74 | 46.75 |
| AT2G33810.1 | Thale cress | nucleus | 27.91 | 45.8 |
| KRH10909 | Soybean | nucleus | 29.3 | 45.65 |
| PGSC0003DMT400085174 | Potato | nucleus | 27.91 | 45.11 |
| Bra005470.1-P | Field mustard | nucleus | 29.77 | 45.07 |
| KRH21401 | Soybean | nucleus | 28.84 | 44.93 |
| KRH20415 | Soybean | nucleus | 29.3 | 44.37 |
| VIT_19s0014g02350.t01 | Wine grape | nucleus | 41.86 | 44.12 |
| KRH22053 | Soybean | nucleus | 38.14 | 43.85 |
| KRH27270 | Soybean | nucleus | 38.14 | 43.85 |
| KRG88838 | Soybean | nucleus | 38.6 | 43.68 |
| CDY27935 | Canola | nucleus | 29.77 | 43.54 |
| CDY57212 | Canola | nucleus | 28.37 | 43.26 |
| KRH50085 | Soybean | nucleus | 29.3 | 43.15 |
| CDY17204 | Canola | nucleus | 28.37 | 42.96 |
| KRH55227 | Soybean | nucleus | 36.74 | 42.7 |
| CDY37684 | Canola | nucleus | 27.91 | 42.55 |
| Solyc07g062980.2.1 | Tomato | nucleus | 26.05 | 42.42 |
| Bra021880.1-P | Field mustard | nucleus | 27.44 | 41.84 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 40.93 | 40.93 |
| CDY24113 | Canola | nucleus | 30.23 | 40.37 |
| KRH22367 | Soybean | nucleus | 28.84 | 39.24 |
| CDY50515 | Canola | nucleus | 27.91 | 38.22 |
| AT1G53160.1 | Thale cress | nucleus | 30.23 | 37.36 |
| AT3G15270.1 | Thale cress | nucleus | 31.16 | 37.02 |
| CDX98540 | Canola | nucleus | 30.7 | 36.87 |
| CDY25876 | Canola | nucleus | 29.77 | 36.36 |
| CDX97645 | Canola | nucleus | 30.23 | 36.31 |
| Bra027265.1-P | Field mustard | nucleus | 30.23 | 36.31 |
| Bra039656.1-P | Field mustard | nucleus | 30.23 | 36.11 |
| CDY20128 | Canola | nucleus | 29.3 | 35.8 |
| Bra038101.1-P | Field mustard | nucleus | 30.23 | 35.52 |
| Bra021094.1-P | Field mustard | nucleus | 28.84 | 35.23 |
| CDY61210 | Canola | nucleus | 29.3 | 35.2 |
| KXG36284 | Sorghum | nucleus | 35.35 | 34.86 |
| CDY32310 | Canola | nucleus | 27.91 | 34.09 |
| CDX79544 | Canola | nucleus | 27.91 | 32.09 |
| EES04609 | Sorghum | nucleus | 29.3 | 18.69 |
| EES11232 | Sorghum | nucleus | 35.81 | 18.42 |
| EER99092 | Sorghum | nucleus | 31.63 | 17.53 |
| EES14266 | Sorghum | nucleus | 32.56 | 17.11 |
| EES11579 | Sorghum | nucleus | 31.16 | 16.75 |
| EER88765 | Sorghum | nucleus | 33.49 | 16.22 |
| EES01979 | Sorghum | nucleus | 30.23 | 16.13 |
| KXG25534 | Sorghum | nucleus | 31.16 | 14.69 |
| OQU84482 | Sorghum | nucleus | 29.77 | 14.38 |
| EER97011 | Sorghum | nucleus | 30.23 | 14.01 |
| OQU77017 | Sorghum | nucleus | 27.44 | 13.41 |
| EES04495 | Sorghum | nucleus | 27.91 | 12.5 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | UniProt:C5X9B0 | EnsemblPlants:EER97257 | ProteinID:EER97257 | ProteinID:EER97257.3 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005886 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 | GO:GO:0046872 | InterPro:IPR004333 |
| InterPro:IPR036893 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF60 | InterPro:SBP_dom |
| InterPro:SBP_sf | EnsemblPlantsGene:SORBI_3002G312200 | SUPFAM:SSF103612 | UniParc:UPI0003C67B01 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:-:68569338..68574778
Molecular Weight (calculated)
21475.9 Da
IEP (calculated)
10.692
GRAVY (calculated)
-0.455
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRKSKSTKG SAASSAAASM AALAAAAAAG DSSADPGAED NVPAKMAAVG DVSSSSPVAA RRSVAAAGGA ASSSSPVPAA ARRGAAAAAA ASVAAGGGGG
101: GGPRCQAERC NANLMTDEKP YNRRHKVCEA HSKAPVVLVA GLRQRFCQQC SRFHELSEFD DIKRSCRLRL AGHNERRRKS SADAHGGGGA GAGAGNGFRQ
201: HADQNGPAGN HFQIR
101: GGPRCQAERC NANLMTDEKP YNRRHKVCEA HSKAPVVLVA GLRQRFCQQC SRFHELSEFD DIKRSCRLRL AGHNERRRKS SADAHGGGGA GAGAGNGFRQ
201: HADQNGPAGN HFQIR
001: MEGKRSQGQG YMKKKSYLVE EDMETDTDEE EEVGRDRVRG SRGSINRGGS LRLCQVDRCT ADMKEAKLYH RRHKVCEVHA KASSVFLSGL NQRFCQQCSR
101: FHDLQEFDEA KRSCRRRLAG HNERRRKSSG ESTYGEGSGR RGINGQVVMQ NQERSRIRVR SVTYPKAQGN Y
101: FHDLQEFDEA KRSCRRRLAG HNERRRKSSG ESTYGEGSGR RGINGQVVMQ NQERSRIRVR SVTYPKAQGN Y
Arabidopsis Description
SPL4Squamosa promoter-binding-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7A9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.