Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058753 | Potato | nucleus | 60.0 | 62.22 |
| Solyc10g009080.2.1 | Tomato | nucleus | 57.86 | 60.0 |
| AT2G33810.1 | Thale cress | nucleus | 55.71 | 59.54 |
| Solyc02g077920.2.1 | Tomato | nucleus | 56.43 | 58.09 |
| PGSC0003DMT400076399 | Potato | nucleus | 56.43 | 58.09 |
| Bra021880.1-P | Field mustard | nucleus | 57.14 | 56.74 |
| CDY37684 | Canola | nucleus | 56.43 | 56.03 |
| CDY27935 | Canola | nucleus | 58.57 | 55.78 |
| Bra005470.1-P | Field mustard | nucleus | 56.43 | 55.63 |
| CDY57212 | Canola | nucleus | 55.71 | 55.32 |
| CDY17204 | Canola | nucleus | 55.71 | 54.93 |
| KRH20415 | Soybean | nucleus | 50.71 | 50.0 |
| KRH10909 | Soybean | nucleus | 49.29 | 50.0 |
| KRH50085 | Soybean | nucleus | 51.43 | 49.32 |
| KRH21401 | Soybean | nucleus | 48.57 | 49.28 |
| CDY24113 | Canola | nucleus | 55.71 | 48.45 |
| CDY50515 | Canola | nucleus | 54.29 | 48.41 |
| Bra039656.1-P | Field mustard | nucleus | 56.43 | 43.89 |
| CDY61210 | Canola | nucleus | 55.71 | 43.58 |
| CDY25876 | Canola | nucleus | 54.29 | 43.18 |
| Bra038101.1-P | Field mustard | nucleus | 56.43 | 43.17 |
| VIT_12s0028g03350.t01 | Wine grape | nucleus | 51.43 | 42.6 |
| AT1G53160.1 | Thale cress | nucleus | 52.86 | 42.53 |
| AT3G15270.1 | Thale cress | nucleus | 52.86 | 40.88 |
| Bra027265.1-P | Field mustard | nucleus | 52.14 | 40.78 |
| CDX97645 | Canola | nucleus | 52.14 | 40.78 |
| CDX98540 | Canola | nucleus | 51.43 | 40.22 |
| VIT_19s0014g02350.t01 | Wine grape | nucleus | 58.57 | 40.2 |
| CDX79544 | Canola | nucleus | 52.86 | 39.57 |
| CDY20128 | Canola | nucleus | 49.29 | 39.2 |
| Bra021094.1-P | Field mustard | nucleus | 49.29 | 39.2 |
| CDY32310 | Canola | nucleus | 48.57 | 38.64 |
| EER97257 | Sorghum | nucleus | 47.14 | 30.7 |
| Os07t0505200-01 | Rice | nucleus | 47.14 | 30.56 |
| VIT_04s0210g00170.t01 | Wine grape | nucleus | 43.57 | 29.47 |
| Zm00001d021573_P001 | Maize | mitochondrion | 41.43 | 28.16 |
| KXG36284 | Sorghum | nucleus | 41.43 | 26.61 |
| Zm00001d006451_P001 | Maize | mitochondrion | 46.43 | 25.59 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 41.43 | 19.08 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 46.43 | 17.15 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 42.86 | 15.87 |
| VIT_15s0021g02290.t01 | Wine grape | nucleus | 43.57 | 15.29 |
| VIT_17s0000g01260.t01 | Wine grape | nucleus | 41.43 | 14.46 |
| VIT_01s0010g03910.t01 | Wine grape | nucleus | 39.29 | 14.14 |
| VIT_01s0010g03710.t01 | Wine grape | nucleus | 42.86 | 12.58 |
| VIT_11s0065g00170.t01 | Wine grape | nucleus | 39.29 | 11.83 |
| VIT_01s0011g00130.t01 | Wine grape | nucleus | 40.0 | 11.05 |
| VIT_17s0000g05020.t01 | Wine grape | nucleus | 42.86 | 10.77 |
Protein Annotations
| EntrezGene:100250271 | wikigene:100250271 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | ProteinID:CBI30591 | ProteinID:CBI30591.3 |
| UniProt:D7TJB9 | EMBL:FN595992 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009911 | GO:GO:0009987 | GO:GO:0010228 |
| GO:GO:0010229 | GO:GO:0010321 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | EntrezGene:LOC100250271 |
| wikigene:LOC100250271 | PFAM:PF03110 | PIRSF:PIRSF037575 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF58 |
| InterPro:SBP_dom | InterPro:SBP_fam | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI00015CCCF6 | ArrayExpress:VIT_10s0003g00050 |
| EnsemblPlantsGene:VIT_10s0003g00050 | EnsemblPlants:VIT_10s0003g00050.t01 | unigene:Vvi.20212 | RefSeq:XP_002280052 | RefSeq:XP_002280052.1 | SEG:seg |
Description
Squamosa promoter-binding-like protein [Source:UniProtKB/TrEMBL;Acc:D7TJB9]
Coordinates
chr10:+:1346397..1348736
Molecular Weight (calculated)
15725.3 Da
IEP (calculated)
8.150
GRAVY (calculated)
-1.191
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMSKAQGKR TLMEEEEEDD EDTVGLGFGE DEKKKKAVTL TNKKGSGGAG STPPSCQVDN CTADMSEAKR YHKRHRVCEH HAKAPVILIA GIQQRFCQQC
101: SRFHELSEFD DTKRSCRRRL AGHNERRRKS SSESHGEGSS
101: SRFHELSEFD DTKRSCRRRL AGHNERRRKS SSESHGEGSS
001: MSMRRSKAEG KRSLRELSEE EEEEEETEDE DTFEEEEALE KKQKGKATSS SGVCQVESCT ADMSKAKQYH KRHKVCQFHA KAPHVRISGL HQRFCQQCSR
101: FHALSEFDEA KRSCRRRLAG HNERRRKSTT D
101: FHALSEFDEA KRSCRRRLAG HNERRRKSTT D
Arabidopsis Description
SPL3Squamosa promoter-binding-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P93015]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.