Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98540 | Canola | nucleus | 83.43 | 84.36 |
| Bra027265.1-P | Field mustard | nucleus | 82.32 | 83.24 |
| CDX97645 | Canola | nucleus | 82.32 | 83.24 |
| Bra021094.1-P | Field mustard | nucleus | 80.11 | 82.39 |
| CDY20128 | Canola | nucleus | 80.11 | 82.39 |
| CDY32310 | Canola | nucleus | 78.45 | 80.68 |
| AT1G53160.1 | Thale cress | nucleus | 65.19 | 67.82 |
| VIT_10s0003g00050.t01 | Wine grape | nucleus | 40.88 | 52.86 |
| PGSC0003DMT400058753 | Potato | nucleus | 38.12 | 51.11 |
| PGSC0003DMT400076399 | Potato | nucleus | 37.57 | 50.0 |
| Solyc10g009080.2.1 | Tomato | nucleus | 37.02 | 49.63 |
| AT2G33810.1 | Thale cress | nucleus | 34.25 | 47.33 |
| Solyc02g077920.2.1 | Tomato | nucleus | 35.36 | 47.06 |
| KRH10909 | Soybean | nucleus | 33.7 | 44.2 |
| KRH21401 | Soybean | nucleus | 33.15 | 43.48 |
| KRH50085 | Soybean | nucleus | 34.25 | 42.47 |
| KRH20415 | Soybean | nucleus | 32.04 | 40.85 |
| EER97257 | Sorghum | nucleus | 37.02 | 31.16 |
| Os07t0505200-01 | Rice | nucleus | 37.02 | 31.02 |
| Zm00001d006451_P001 | Maize | mitochondrion | 38.12 | 27.17 |
| Zm00001d021573_P001 | Maize | mitochondrion | 29.83 | 26.21 |
| KXG36284 | Sorghum | nucleus | 29.83 | 24.77 |
| AT2G42200.1 | Thale cress | nucleus | 34.81 | 16.8 |
| AT1G02065.1 | Thale cress | nucleus | 30.39 | 16.52 |
| AT3G57920.1 | Thale cress | nucleus | 30.94 | 15.82 |
| AT1G69170.1 | Thale cress | nucleus | 32.04 | 14.32 |
| AT5G50670.2 | Thale cress | nucleus | 27.07 | 13.65 |
| AT5G50570.2 | Thale cress | nucleus | 27.07 | 13.65 |
| AT5G43270.1 | Thale cress | nucleus | 29.83 | 12.89 |
| AT1G27370.1 | Thale cress | nucleus | 27.62 | 12.63 |
| AT1G27360.1 | Thale cress | nucleus | 27.07 | 12.47 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | EntrezGene:820758 | UniProt:A0A178VL13 | ProteinID:AEE75639.1 | EMBL:AJ011610 |
| EMBL:AJ242960 | EMBL:AK118611 | ArrayExpress:AT3G15270 | EnsemblPlantsGene:AT3G15270 | RefSeq:AT3G15270 | TAIR:AT3G15270 |
| RefSeq:AT3G15270-TAIR-G | EnsemblPlants:AT3G15270.1 | TAIR:AT3G15270.1 | ProteinID:BAB02156.1 | EMBL:BT003714 | ProteinID:CAB56571.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0010321 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | RefSeq:NP_188145.1 |
| ProteinID:OAP06398.1 | PFAM:PF03110 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0009062 | PO:PO:0025022 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF64 | UniProt:Q9S758 |
| InterPro:SBP_dom | InterPro:SBP_sf | Symbol:SPL5 | SUPFAM:SSF103612 | UniParc:UPI000000C11E | SEG:seg |
Description
SPL5SPL5 [Source:UniProtKB/TrEMBL;Acc:A0A178VL13]
Coordinates
chr3:-:5140365..5142323
Molecular Weight (calculated)
20992.8 Da
IEP (calculated)
10.363
GRAVY (calculated)
-1.243
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGQRTQRRG YLKDKATVSN LVEEEMENGM DGEEEDGGDE DKRKKVMERV RGPSTDRVPS RLCQVDRCTV NLTEAKQYYR RHRVCEVHAK ASAATVAGVR
101: QRFCQQCSRF HELPEFDEAK RSCRRRLAGH NERRRKISGD SFGEGSGRRG FSGQLIQTQE RNRVDRKLPM TNSSFKRPQI R
101: QRFCQQCSRF HELPEFDEAK RSCRRRLAGH NERRRKISGD SFGEGSGRRG FSGQLIQTQE RNRVDRKLPM TNSSFKRPQI R
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.