Factsheet for Bra021094.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20128	Canola	nucleus	98.86	98.86
CDY32310	Canola	nucleus	94.89	94.89
AT3G15270.1	Thale cress	nucleus	82.39	80.11
Bra027265.1-P	Field mustard	nucleus	80.11	78.77
Bra039656.1-P	Field mustard	nucleus	66.48	65.0
Bra038101.1-P	Field mustard	nucleus	65.91	63.39
PGSC0003DMT400058753	Potato	nucleus	39.2	51.11
PGSC0003DMT400076399	Potato	nucleus	39.2	50.74
Bra005470.1-P	Field mustard	nucleus	40.91	50.7
Solyc10g009080.2.1	Tomato	nucleus	38.07	49.63
VIT_10s0003g00050.t01	Wine grape	nucleus	39.2	49.29
Solyc02g077920.2.1	Tomato	nucleus	36.93	47.79
Bra021880.1-P	Field mustard	nucleus	35.23	43.97
KRH21401	Soybean	nucleus	34.09	43.48
KRH10909	Soybean	nucleus	33.52	42.75
KRH50085	Soybean	nucleus	35.23	42.47
KRH20415	Soybean	nucleus	32.95	40.85
Bra032662.1-P	Field mustard	nucleus	30.68	34.18
EER97257	Sorghum	nucleus	35.23	28.84
Os07t0505200-01	Rice	nucleus	34.66	28.24
Zm00001d021573_P001	Maize	mitochondrion	30.68	26.21
Zm00001d006451_P001	Maize	mitochondrion	35.8	24.8
KXG36284	Sorghum	nucleus	29.55	23.85
Bra004363.1-P	Field mustard	nucleus	30.68	17.94
Bra033221.1-P	Field mustard	nucleus	32.95	17.68
Bra038324.1-P	Field mustard	nucleus	30.68	16.56
Bra014599.1-P	Field mustard	nucleus	28.41	16.56
Bra003305.1-P	Field mustard	nucleus	28.41	15.82
Bra016891.1-P	Field mustard	nucleus	32.39	15.7
Bra004674.1-P	Field mustard	nucleus	32.39	15.45
Bra032823.1-P	Field mustard	nucleus	27.27	14.63
Bra010949.1-P	Field mustard	nucleus	30.11	14.48
Bra022766.1-P	Field mustard	nucleus	27.84	14.33
Bra033671.1-P	Field mustard	nucleus	28.98	14.09
Bra032822.1-P	Field mustard	nucleus	28.41	13.7
Bra030040.1-P	Field mustard	nucleus	28.98	13.08
Bra030041.1-P	Field mustard	nucleus	27.27	12.83
Bra027478.1-P	Field mustard	nucleus	28.41	12.82

Protein Annotations

MapMan:15.5.18	Gene3D:4.10.1100.10	EnsemblPlantsGene:Bra021094	EnsemblPlants:Bra021094.1	EnsemblPlants:Bra021094.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0046872	InterPro:IPR004333	InterPro:IPR036893	UniProt:M4DX48	PFAM:PF03110
PFscan:PS51141	PANTHER:PTHR31251	InterPro:SBP_dom	InterPro:SBP_sf	SUPFAM:SSF103612	UniParc:UPI0002543FA0
SEG:seg	:	:	:	:	:

Description

AT3G15270 (E=1e-064) SPL5 | SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5); DNA binding / transcription factor

Coordinates

chrA01:+:24000368..24000990

Molecular Weight (calculated)

20443.0 Da

IEP (calculated)

10.137

GRAVY (calculated)

-1.178

Length

176 amino acids

Sequence
(BLAST)

001: MEKSQRWSYV KDKAIVSSLA EQEWENSMDG EEEDAGDEDK RKRVMERARG TNTDRVPPRL CQVHRCTANL TEAKQYYRRH KVCEVHAKAS AATVSGAKQR
101: FCQQCSRFHE LPEFDEAKRS CRMRLAGHNE RRRKVSGDSF GERSGRRGFS GQLIQTQERN KVDIKFPMAN TSFKRP

Best Arabidopsis Sequence Match ( AT3G15270.1 )
(BLAST)

001: MEGQRTQRRG YLKDKATVSN LVEEEMENGM DGEEEDGGDE DKRKKVMERV RGPSTDRVPS RLCQVDRCTV NLTEAKQYYR RHRVCEVHAK ASAATVAGVR
101: QRFCQQCSRF HELPEFDEAK RSCRRRLAGH NERRRKISGD SFGEGSGRRG FSGQLIQTQE RNRVDRKLPM TNSSFKRPQI R

Arabidopsis Description

SPL5SPL5 [Source:UniProtKB/TrEMBL;Acc:A0A178VL13]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.