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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32959 Canola nucleus 99.74 99.74
CDY43604 Canola nucleus 93.08 94.29
Bra033671.1-P Field mustard nucleus 74.36 80.11
Os02t0139400-01 Rice nucleus 29.23 40.43
Bra005470.1-P Field mustard nucleus 13.85 38.03
VIT_01s0010g03710.t01 Wine grape nucleus 46.15 37.74
Bra021880.1-P Field mustard nucleus 13.08 36.17
Bra030040.1-P Field mustard nucleus 35.64 35.64
Bra032662.1-P Field mustard nucleus 14.36 35.44
Bra030041.1-P Field mustard nucleus 33.85 35.29
PGSC0003DMT400084734 Potato nucleus 42.05 35.27
Bra032823.1-P Field mustard nucleus 29.49 35.06
Solyc05g015510.2.1 Tomato nucleus 41.54 34.99
Bra032822.1-P Field mustard nucleus 31.54 33.7
Bra010949.1-P Field mustard nucleus 31.54 33.61
Solyc04g045560.2.1 Tomato nucleus 29.74 33.14
GSMUA_Achr9P14160_001 Banana nucleus 38.46 32.75
PGSC0003DMT400068752 Potato nucleus 32.31 32.73
Os02t0174100-02 Rice nucleus 21.03 32.67
GSMUA_Achr4P05720_001 Banana nucleus 28.97 32.66
GSMUA_Achr5P21990_001 Banana nucleus 35.38 31.87
GSMUA_Achr9P23140_001 Banana nucleus 33.85 31.73
GSMUA_Achr4P12470_001 Banana nucleus 27.95 31.14
TraesCS6A01G155300.1 Wheat nucleus 25.64 30.49
TraesCS6D01G145200.1 Wheat nucleus 25.38 30.46
GSMUA_Achr5P22630_001 Banana nucleus 35.38 30.4
TraesCS6B01G183400.1 Wheat nucleus 25.38 30.28
GSMUA_Achr3P05360_001 Banana nucleus 35.9 30.17
GSMUA_Achr6P36010_001 Banana nucleus 33.59 29.91
Zm00001d015410_P002 Maize nucleus 25.38 29.82
HORVU6Hr1G031450.6 Barley nucleus 24.87 29.75
GSMUA_Achr3P27750_001 Banana nucleus 35.64 29.64
Zm00001d053775_P001 Maize nucleus 25.13 29.61
Os06t0703500-02 Rice nucleus 35.9 29.47
Zm00001d014698_P001 Maize nucleus 33.08 29.39
EES04609 Sorghum nucleus 25.38 29.38
OQU77017 Sorghum nucleus 33.08 29.32
TraesCS6D01G098500.1 Wheat nucleus 35.38 29.18
GSMUA_Achr10P... Banana nucleus 37.44 28.97
TraesCS6B01G138400.1 Wheat nucleus 35.13 28.96
Bra038101.1-P Field mustard nucleus 13.59 28.96
GSMUA_Achr10P... Banana nucleus 35.9 28.75
TraesCS6A01G110100.2 Wheat nucleus 34.87 28.63
EES04495 Sorghum nucleus 35.13 28.54
Bra027265.1-P Field mustard nucleus 13.08 28.49
Bra021094.1-P Field mustard nucleus 12.82 28.41
Bra039656.1-P Field mustard nucleus 12.82 27.78
HORVU6Hr1G019700.3 Barley nucleus 34.87 26.82
Os06t0663500-00 Rice nucleus 23.33 26.53
Zm00001d053890_P003 Maize nucleus 32.05 25.93
GSMUA_Achr8P23820_001 Banana nucleus 34.87 25.81
Bra003305.1-P Field mustard nucleus 20.77 25.63
Zm00001d015233_P001 Maize mitochondrion, nucleus, plastid 34.62 25.42
Bra004363.1-P Field mustard nucleus 19.23 24.92
Bra014599.1-P Field mustard nucleus 18.72 24.17
Bra004674.1-P Field mustard nucleus 22.56 23.85
Bra038324.1-P Field mustard nucleus 19.74 23.62
Bra016891.1-P Field mustard nucleus 21.79 23.42
Bra022766.1-P Field mustard nucleus 20.26 23.1
Bra033221.1-P Field mustard nucleus 18.72 22.26
Protein Annotations
MapMan:15.5.18Gene3D:4.10.1100.10EnsemblPlantsGene:Bra027478EnsemblPlants:Bra027478.1EnsemblPlants:Bra027478.1-PGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0046872InterPro:IPR004333InterPro:IPR036893UniProt:M4EFB6PFAM:PF03110
PFscan:PS51141PANTHER:PTHR31251PANTHER:PTHR31251:SF30InterPro:SBP_domInterPro:SBP_sfSUPFAM:SSF103612
UniParc:UPI0002542854SEG:seg::::
Description
AT5G43270 (E=6e-115) SPL2 | SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor
Coordinates
chrA09:+:14012960..14014424
Molecular Weight (calculated)
43607.8 Da
IEP (calculated)
8.221
GRAVY (calculated)
-0.703
Length
390 amino acids
Sequence
(BLAST)
001: MECNAQCDWE NLISFGTSSA EIPRKLRPMD WETDEFDCSF PTAACGSSSG LAHAFSKSSK STSISSSSPE ARTLNFTSEE LGSSEEFAKG INTSPSLELS
101: FGSSDPVLGL KLGKRTYFED FWEVENAARG SALPVSLVSS SASPVKKTKS VPQKVQTPRC QVEGCNLDLS SAKDYHRKHR ICENHSKFPK VVVSGVERRF
201: CQQCSRFHCL SEFDEKKRSC RRRLSDHNAR RRKPNPGGTY EGKQQMDFVW NRFALIHPRT EEKFLWPNPK PIPSRGLIQQ PAKTRSAELF SKEKVTISSS
301: MGASQDLDGA LSLLSNSTAW VPSDQPTRFS LDHHPTTNLQ PTAHRSVTHL STVSDYWQPD PPAVEGPTDL HRNGVGQFNE NYFSLNQFYN
Best Arabidopsis Sequence Match ( AT5G43270.2 )
(BLAST)
001: MECNAKPPFQ WELENLISFG TSTAEVPRKL KPMEWEIDGF DCTSLYSSSF AYAGSSGSDI AHAFSKSSKS TSISSSSAEV RTHNFTSETG ESLPGEFAKG
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
Arabidopsis Description
SPL2Squamosa promoter-binding-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S840]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.