Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400084734 | Potato | nucleus | 95.68 | 95.27 |
| Solyc04g045560.2.1 | Tomato | nucleus | 39.52 | 52.29 |
| VIT_01s0010g03710.t01 | Wine grape | nucleus | 52.27 | 50.73 |
| Os02t0139400-01 | Rice | nucleus | 28.51 | 46.81 |
| Bra033671.1-P | Field mustard | nucleus | 33.91 | 43.37 |
| Solyc02g077920.2.1 | Tomato | nucleus | 12.31 | 41.91 |
| Bra027478.1-P | Field mustard | nucleus | 34.99 | 41.54 |
| CDY32959 | Canola | nucleus | 34.99 | 41.54 |
| CDY43604 | Canola | nucleus | 34.34 | 41.3 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 36.72 | 40.87 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 30.67 | 40.57 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 30.24 | 40.46 |
| AT5G43270.1 | Thale cress | nucleus | 36.5 | 40.33 |
| Solyc10g009080.2.1 | Tomato | nucleus | 11.66 | 40.0 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 39.31 | 39.74 |
| Os02t0174100-02 | Rice | nucleus | 21.17 | 39.04 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 36.5 | 38.58 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 38.88 | 38.38 |
| OQU77017 | Sorghum | nucleus | 36.07 | 37.95 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 38.01 | 37.93 |
| TraesCS6B01G183400.1 | Wheat | nucleus | 26.57 | 37.61 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 34.99 | 37.41 |
| TraesCS6A01G155300.1 | Wheat | nucleus | 26.35 | 37.2 |
| Zm00001d014698_P001 | Maize | nucleus | 35.21 | 37.13 |
| HORVU6Hr1G031450.6 | Barley | nucleus | 26.13 | 37.12 |
| TraesCS6D01G145200.1 | Wheat | nucleus | 25.92 | 36.92 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 36.07 | 36.78 |
| EES04609 | Sorghum | nucleus | 26.35 | 36.2 |
| Solyc07g053810.2.1 | Tomato | nucleus | 11.45 | 36.05 |
| Os06t0703500-02 | Rice | nucleus | 36.93 | 36.0 |
| Zm00001d053775_P001 | Maize | nucleus | 25.7 | 35.95 |
| TraesCS6D01G098500.1 | Wheat | nucleus | 36.72 | 35.94 |
| Solyc07g062980.2.1 | Tomato | nucleus | 10.15 | 35.61 |
| TraesCS6A01G110100.2 | Wheat | nucleus | 36.5 | 35.58 |
| TraesCS6B01G138400.1 | Wheat | nucleus | 36.29 | 35.52 |
| Zm00001d015410_P002 | Maize | nucleus | 25.27 | 35.24 |
| EES04495 | Sorghum | nucleus | 36.5 | 35.21 |
| GSMUA_Achr10P... | Banana | nucleus | 38.23 | 35.12 |
| HORVU6Hr1G019700.3 | Barley | nucleus | 38.01 | 34.71 |
| GSMUA_Achr10P... | Banana | nucleus | 36.5 | 34.7 |
| CDY22356 | Canola | nucleus | 38.44 | 34.3 |
| CDY47812 | Canola | nucleus | 37.58 | 33.72 |
| Os06t0663500-00 | Rice | nucleus | 23.76 | 32.07 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 35.42 | 31.12 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 34.77 | 30.32 |
| Zm00001d053890_P003 | Maize | nucleus | 30.45 | 29.25 |
| Solyc10g078700.1.1 | Tomato | nucleus | 21.38 | 26.61 |
| Solyc10g018780.1.1 | Tomato | nucleus | 15.55 | 24.57 |
| Solyc05g015840.2.1 | Tomato | nucleus | 16.2 | 24.04 |
| Solyc01g090730.2.1 | Tomato | nucleus | 14.9 | 23.08 |
| Solyc03g114850.2.1 | Tomato | nucleus | 13.17 | 23.02 |
| Solyc12g038520.1.1 | Tomato | nucleus | 18.14 | 18.79 |
| Solyc05g012040.2.1 | Tomato | nucleus | 19.65 | 16.31 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 |
| InterPro:IPR036893 | UniProt:K4BYR7 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF30 |
| InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | EnsemblPlantsGene:Solyc05g015510.2 | EnsemblPlants:Solyc05g015510.2.1 | UniParc:UPI0002766A8F |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:10767268..10772201
Molecular Weight (calculated)
50421.4 Da
IEP (calculated)
8.718
GRAVY (calculated)
-0.672
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWNVKWDWG NLVMFGSKAS ESPKELQLTD WGVEEEGELD GGSFNLSSGG SGTGGYGSDL KCGSSIKSSI SASTDSSPKD GFKVSNFAFE TFNASPEDPS
101: KKLESSKAEV SRNSPPMEAS VGSVEPVIGL KIGKRTCETF GGGSSAKVSS FPPNPASSAA ATKKAKSSTQ NAPIPHCQVE GCNLDLSSAK EYYRKHRVCD
201: SHSKSPKVIV AGVARRFCQQ CSRFHSVSEF DDKKRSCRRR LSDHNARRRK PHQETIQFNS ARLSSLFYDS RQPMNLVLNE AQLIHSRAAA NATWESTQDS
301: KFSITREFTP KPERTGSTNG KSLLERNQFS RAVGAHSNAS SLLLPSKGTT AEVFNRGAKE SMFNMVTGPE FPRALSLLST NSWGSSEPES VSLNHANQTS
401: MPEQMMQAIP PHMSSQYWQA GQHSSDPRYH TLAAANSNSG GSFQEMGVFK APFDTDFYLN ALN
101: KKLESSKAEV SRNSPPMEAS VGSVEPVIGL KIGKRTCETF GGGSSAKVSS FPPNPASSAA ATKKAKSSTQ NAPIPHCQVE GCNLDLSSAK EYYRKHRVCD
201: SHSKSPKVIV AGVARRFCQQ CSRFHSVSEF DDKKRSCRRR LSDHNARRRK PHQETIQFNS ARLSSLFYDS RQPMNLVLNE AQLIHSRAAA NATWESTQDS
301: KFSITREFTP KPERTGSTNG KSLLERNQFS RAVGAHSNAS SLLLPSKGTT AEVFNRGAKE SMFNMVTGPE FPRALSLLST NSWGSSEPES VSLNHANQTS
401: MPEQMMQAIP PHMSSQYWQA GQHSSDPRYH TLAAANSNSG GSFQEMGVFK APFDTDFYLN ALN
001: MECNAKPPFQ WELENLISFG TSTAEVPRKL KPMEWEIDGF DCTSLYSSSF AYAGSSGSDI AHAFSKSSKS TSISSSSAEV RTHNFTSETG ESLPGEFAKG
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
Arabidopsis Description
SPL2Squamosa promoter-binding-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S840]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.