Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d013465_P001 | |
| Zm00001d033680_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04609 | Sorghum | nucleus | 89.16 | 87.83 |
| Zm00001d053775_P001 | Maize | nucleus | 82.83 | 83.08 |
| HORVU6Hr1G031450.6 | Barley | nucleus | 65.96 | 67.18 |
| TraesCS6D01G145200.1 | Wheat | nucleus | 65.66 | 67.08 |
| TraesCS6B01G183400.1 | Wheat | nucleus | 65.36 | 66.36 |
| TraesCS6A01G155300.1 | Wheat | nucleus | 65.36 | 66.16 |
| Os06t0663500-00 | Rice | nucleus | 51.81 | 50.15 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 36.75 | 28.18 |
| VIT_01s0010g03710.t01 | Wine grape | nucleus | 40.36 | 28.09 |
| VIT_11s0065g00170.t01 | Wine grape | nucleus | 38.25 | 27.31 |
| KRG97402 | Soybean | nucleus | 35.54 | 27.25 |
| Solyc04g045560.2.1 | Tomato | nucleus | 28.61 | 27.14 |
| KRH31506 | Soybean | nucleus | 36.14 | 27.09 |
| Zm00001d021573_P001 | Maize | mitochondrion | 16.57 | 26.7 |
| Bra033671.1-P | Field mustard | nucleus | 28.92 | 26.52 |
| PGSC0003DMT400068752 | Potato | nucleus | 30.72 | 26.49 |
| Bra032823.1-P | Field mustard | nucleus | 25.9 | 26.22 |
| CDY27612 | Canola | nucleus | 25.9 | 26.14 |
| CDY03913 | Canola | nucleus | 28.61 | 25.61 |
| AT5G43270.1 | Thale cress | nucleus | 32.23 | 25.54 |
| Bra027478.1-P | Field mustard | nucleus | 29.82 | 25.38 |
| CDY32959 | Canola | nucleus | 29.82 | 25.38 |
| CDX84927 | Canola | nucleus | 28.01 | 25.34 |
| CDX84928 | Canola | nucleus | 27.71 | 25.27 |
| Solyc05g015510.2.1 | Tomato | nucleus | 35.24 | 25.27 |
| CDY27611 | Canola | nucleus | 27.71 | 25.21 |
| Bra032822.1-P | Field mustard | nucleus | 27.71 | 25.21 |
| PGSC0003DMT400084734 | Potato | nucleus | 34.94 | 24.95 |
| CDY43604 | Canola | nucleus | 28.92 | 24.94 |
| AT1G27370.1 | Thale cress | nucleus | 29.22 | 24.49 |
| CDY03914 | Canola | nucleus | 27.41 | 24.46 |
| Bra030040.1-P | Field mustard | nucleus | 28.61 | 24.36 |
| CDY15712 | Canola | nucleus | 27.41 | 24.33 |
| Bra030041.1-P | Field mustard | nucleus | 27.41 | 24.33 |
| CDY67700 | Canola | nucleus | 25.3 | 24.28 |
| Zm00001d014698_P001 | Maize | nucleus | 31.93 | 24.15 |
| CDY15713 | Canola | nucleus | 28.31 | 24.1 |
| Zm00001d053890_P003 | Maize | nucleus | 34.64 | 23.86 |
| Bra010949.1-P | Field mustard | nucleus | 25.3 | 22.95 |
| Zm00001d006451_P001 | Maize | mitochondrion | 17.47 | 22.83 |
| CDY11816 | Canola | nucleus | 25.0 | 22.74 |
| AT1G27360.1 | Thale cress | nucleus | 26.2 | 22.14 |
| Zm00001d012015_P001 | Maize | nucleus | 24.4 | 21.6 |
| Zm00001d042319_P001 | Maize | nucleus | 26.51 | 21.52 |
| Zm00001d006091_P001 | Maize | nucleus | 27.41 | 21.51 |
| Zm00001d020941_P001 | Maize | nucleus | 24.4 | 21.43 |
| Zm00001d006028_P001 | Maize | nucleus | 24.7 | 21.41 |
| Zm00001d049822_P001 | Maize | nucleus | 27.71 | 21.3 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 34.04 | 21.28 |
| Zm00001d049824_P002 | Maize | nucleus | 27.71 | 21.15 |
| CDY47812 | Canola | nucleus | 32.53 | 20.93 |
| CDY22356 | Canola | nucleus | 32.53 | 20.81 |
| Zm00001d026175_P001 | Maize | nucleus | 24.7 | 20.55 |
| Zm00001d002005_P001 | Maize | nucleus | 24.1 | 20.05 |
| Zm00001d021056_P001 | Maize | nucleus | 28.01 | 20.0 |
| Zm00001d026491_P001 | Maize | nucleus | 23.8 | 19.95 |
| Zm00001d031451_P001 | Maize | nucleus | 21.99 | 18.11 |
| Zm00001d052890_P001 | Maize | nucleus | 21.99 | 17.89 |
| Zm00001d053756_P001 | Maize | nucleus | 21.08 | 17.24 |
| Zm00001d036692_P001 | Maize | nucleus | 21.39 | 16.36 |
| Zm00001d046906_P001 | Maize | nucleus | 20.48 | 16.04 |
| Zm00001d015451_P001 | Maize | nucleus | 21.08 | 15.87 |
Protein Annotations
| EntrezGene:100191346 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | ProteinID:AQK68793.1 | UniProt:B4F8H7 | EMBL:BT033415 |
| EMBL:BT087508 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EMBL:HQ858786 | InterPro:IPR004333 |
| InterPro:IPR036893 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF7 | InterPro:SBP_dom |
| InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI00017B63A9 | EnsemblPlantsGene:Zm00001d015410 | EnsemblPlants:Zm00001d015410_P002 | EnsemblPlants:Zm00001d015410_T002 |
| SEG:seg | : | : | : | : | : |
Description
SBP-transcription factor 31Squamosa promoter-binding-like protein 2
Coordinates
chr5:+:89049594..89053097
Molecular Weight (calculated)
36516.6 Da
IEP (calculated)
8.824
GRAVY (calculated)
-0.692
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWTAPKPAS SPPLLWDWGD HAATGSGSSS DAPARRGGKE REAKRARAGE DRGGGELRCQ VEGCGLDLSR VKDYHRKHRV CEAHTKSPRV IVAGQERRFC
101: QQCSRFHALS EFDQKKRSCR RRLSDHNARR RKPQPDAFTF ASAKLPSTLF DDRRQISFVW NKAPVSHVRP FTSPWDSSSD LKPPYAKEIS DVSTKVGTIT
201: GQVHLDKSHM FNAIPTLSHG KDEPWPMKGL DMSISASKFD GAADLQHALS LLSAGACGLP DSVHQTSCII QFNGASENSS DLHVTHGRNS GPASCADAQH
301: IAAQPQSQLF HFTTDTGNTV YEPSFFGVNQ IN
101: QQCSRFHALS EFDQKKRSCR RRLSDHNARR RKPQPDAFTF ASAKLPSTLF DDRRQISFVW NKAPVSHVRP FTSPWDSSSD LKPPYAKEIS DVSTKVGTIT
201: GQVHLDKSHM FNAIPTLSHG KDEPWPMKGL DMSISASKFD GAADLQHALS LLSAGACGLP DSVHQTSCII QFNGASENSS DLHVTHGRNS GPASCADAQH
301: IAAQPQSQLF HFTTDTGNTV YEPSFFGVNQ IN
001: MECNAKPPFQ WELENLISFG TSTAEVPRKL KPMEWEIDGF DCTSLYSSSF AYAGSSGSDI AHAFSKSSKS TSISSSSAEV RTHNFTSETG ESLPGEFAKG
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
Arabidopsis Description
SPL2Squamosa promoter-binding-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S840]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.